Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MHB41_RS05120 Genome accession   NZ_CP152045
Coordinates   1019522..1020472 (+) Length   316 a.a.
NCBI ID   WP_041117046.1    Uniprot ID   -
Organism   Bacillus sp. FSL H7-0578     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1014522..1025472
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHB41_RS05095 (MHB41_05095) - 1016001..1016861 (+) 861 WP_034282185.1 SDR family oxidoreductase -
  MHB41_RS05100 (MHB41_05100) - 1016918..1017154 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  MHB41_RS05105 (MHB41_05105) comK 1017444..1018022 (+) 579 WP_041117040.1 competence protein ComK Regulator
  MHB41_RS05110 (MHB41_05110) - 1018321..1018803 (+) 483 WP_070325675.1 hypothetical protein -
  MHB41_RS05115 (MHB41_05115) - 1019086..1019361 (+) 276 WP_340900249.1 barstar family protein -
  MHB41_RS05120 (MHB41_05120) ceuB 1019522..1020472 (+) 951 WP_041117046.1 ABC transporter permease Machinery gene
  MHB41_RS05125 (MHB41_05125) - 1020465..1021415 (+) 951 WP_340899050.1 iron chelate uptake ABC transporter family permease subunit -
  MHB41_RS05130 (MHB41_05130) - 1021406..1022164 (+) 759 WP_041110022.1 ATP-binding cassette domain-containing protein -
  MHB41_RS05135 (MHB41_05135) - 1022187..1023131 (+) 945 WP_340899048.1 siderophore ABC transporter substrate-binding protein -
  MHB41_RS05140 (MHB41_05140) - 1023270..1024223 (+) 954 WP_034282168.1 LCP family protein -
  MHB41_RS05145 (MHB41_05145) - 1024292..1024654 (-) 363 WP_034282166.1 hypothetical protein -
  MHB41_RS05150 (MHB41_05150) - 1024811..1025428 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34905.23 Da        Isoelectric Point: 9.6338

>NTDB_id=986649 MHB41_RS05120 WP_041117046.1 1019522..1020472(+) (ceuB) [Bacillus sp. FSL H7-0578]
MKLYQLSLLFVCLACISLFVGVQDLSILELFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=986649 MHB41_RS05120 WP_041117046.1 1019522..1020472(+) (ceuB) [Bacillus sp. FSL H7-0578]
ATGAAGTTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTAGAACTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATCAAGGTGAATGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCTGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGGATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTTTCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GGCTCATGGTAGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491

Multiple sequence alignment