Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHI16_RS11390 | Genome accession | NZ_CP152044 |
| Coordinates | 2241321..2241656 (+) | Length | 111 a.a. |
| NCBI ID | WP_012010555.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-0923 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2236321..2246656
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHI16_RS11370 (MHI16_11370) | gcvT | 2236799..2237896 (-) | 1098 | WP_144462734.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHI16_RS11375 (MHI16_11375) | - | 2238458..2240128 (+) | 1671 | WP_061408550.1 | SNF2-related protein | - |
| MHI16_RS11380 (MHI16_11380) | - | 2240143..2240940 (+) | 798 | WP_144462732.1 | YqhG family protein | - |
| MHI16_RS11385 (MHI16_11385) | - | 2241123..2241287 (+) | 165 | WP_003217357.1 | anti-repressor SinI family protein | - |
| MHI16_RS11390 (MHI16_11390) | sinR | 2241321..2241656 (+) | 336 | WP_012010555.1 | transcriptional regulator SinR | Regulator |
| MHI16_RS11395 (MHI16_11395) | - | 2241724..2242524 (-) | 801 | WP_058014688.1 | TasA family protein | - |
| MHI16_RS11400 (MHI16_11400) | - | 2242582..2243154 (-) | 573 | WP_058014687.1 | signal peptidase I | - |
| MHI16_RS11405 (MHI16_11405) | tapA | 2243199..2243726 (-) | 528 | WP_058014686.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHI16_RS11410 (MHI16_11410) | - | 2243993..2244304 (+) | 312 | WP_061410249.1 | YqzG/YhdC family protein | - |
| MHI16_RS11415 (MHI16_11415) | - | 2244338..2244532 (-) | 195 | WP_044140973.1 | YqzE family protein | - |
| MHI16_RS11420 (MHI16_11420) | comGG | 2244592..2244975 (-) | 384 | WP_058014684.1 | competence type IV pilus minor pilin ComGG | - |
| MHI16_RS11425 (MHI16_11425) | comGF | 2244972..2245472 (-) | 501 | WP_061408553.1 | competence type IV pilus minor pilin ComGF | - |
| MHI16_RS11430 (MHI16_11430) | comGE | 2245411..2245728 (-) | 318 | WP_058014682.1 | competence type IV pilus minor pilin ComGE | - |
| MHI16_RS11435 (MHI16_11435) | comGD | 2245712..2246158 (-) | 447 | WP_061408555.1 | competence type IV pilus minor pilin ComGD | - |
| MHI16_RS11440 (MHI16_11440) | comGC | 2246151..2246444 (-) | 294 | WP_003217322.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 13001.59 Da Isoelectric Point: 5.2831
>NTDB_id=986610 MHI16_RS11390 WP_012010555.1 2241321..2241656(+) (sinR) [Bacillus sp. FSL K6-0923]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=986610 MHI16_RS11390 WP_012010555.1 2241321..2241656(+) (sinR) [Bacillus sp. FSL K6-0923]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |