Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   MHI16_RS05820 Genome accession   NZ_CP152044
Coordinates   1174468..1175430 (+) Length   320 a.a.
NCBI ID   WP_058014312.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0923     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1169468..1180430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI16_RS05790 (MHI16_05790) argF 1169797..1170747 (+) 951 WP_058014316.1 ornithine carbamoyltransferase -
  MHI16_RS05795 (MHI16_05795) - 1170850..1171029 (+) 180 WP_003211282.1 YjzC family protein -
  MHI16_RS05800 (MHI16_05800) - 1171199..1172464 (+) 1266 WP_058014315.1 MFS transporter -
  MHI16_RS05805 (MHI16_05805) - 1172580..1172774 (-) 195 WP_003211779.1 YjzD family protein -
  MHI16_RS05810 (MHI16_05810) - 1172986..1173726 (+) 741 WP_058014314.1 hypothetical protein -
  MHI16_RS05815 (MHI16_05815) - 1173802..1174377 (+) 576 WP_058014313.1 hypothetical protein -
  MHI16_RS05820 (MHI16_05820) med 1174468..1175430 (+) 963 WP_058014312.1 BMP family ABC transporter substrate-binding protein Regulator
  MHI16_RS05825 (MHI16_05825) comZ 1175441..1175638 (+) 198 WP_058014495.1 ComZ family protein Regulator
  MHI16_RS05830 (MHI16_05830) - 1175649..1175882 (-) 234 WP_058014311.1 hypothetical protein -
  MHI16_RS05835 (MHI16_05835) - 1176052..1176990 (+) 939 WP_012009552.1 beta-ketoacyl-ACP synthase III -
  MHI16_RS05840 (MHI16_05840) fabF 1177012..1178253 (+) 1242 WP_058014310.1 beta-ketoacyl-ACP synthase II -
  MHI16_RS05845 (MHI16_05845) - 1178331..1179134 (+) 804 WP_058014309.1 DUF2268 domain-containing protein -
  MHI16_RS05850 (MHI16_05850) - 1179295..1180275 (+) 981 WP_058014308.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 320 a.a.        Molecular weight: 35619.54 Da        Isoelectric Point: 5.4531

>NTDB_id=986591 MHI16_RS05820 WP_058014312.1 1174468..1175430(+) (med) [Bacillus sp. FSL K6-0923]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYGIIAKKFNEGKLNAQGEYSFDFKEGVIEMGKFSSTIDRAFLKDIESDIATYKKTGKLPNEK

Nucleotide


Download         Length: 963 bp        

>NTDB_id=986591 MHI16_RS05820 WP_058014312.1 1174468..1175430(+) (med) [Bacillus sp. FSL K6-0923]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACTATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAATTTAATCAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTTGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGACGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCTGAGTTTGTCGA
AAACTGGGATGATGCGGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAACAAGGCGTAGATGTTGTATATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCTGCGATCGGATATGTCACCGATCAATCC
AACCTCGGCAGCCATACCGTTTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACGGTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAATGCACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCTA
CCATTGACCGTGCTTTTTTGAAAGACATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

63.898

97.813

0.625


Multiple sequence alignment