Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MHB69_RS11060 Genome accession   NZ_CP152043
Coordinates   2159903..2160706 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus sp. FSL K6-0994     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2154903..2165706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHB69_RS11045 (MHB69_11045) - 2157108..2157344 (+) 237 WP_024422931.1 DUF2627 domain-containing protein -
  MHB69_RS11050 (MHB69_11050) - 2157381..2158118 (-) 738 WP_024422932.1 glycerophosphodiester phosphodiesterase -
  MHB69_RS11055 (MHB69_11055) - 2158346..2159446 (-) 1101 WP_024422933.1 Rap family tetratricopeptide repeat protein -
  MHB69_RS11060 (MHB69_11060) spo0A 2159903..2160706 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  MHB69_RS11065 (MHB69_11065) spoIVB 2160991..2162268 (-) 1278 WP_342495559.1 SpoIVB peptidase -
  MHB69_RS11070 (MHB69_11070) recN 2162469..2164202 (-) 1734 WP_342495560.1 DNA repair protein RecN Machinery gene
  MHB69_RS11075 (MHB69_11075) argR 2164236..2164685 (-) 450 WP_024422938.1 transcriptional regulator ArgR -
  MHB69_RS11080 (MHB69_11080) - 2164849..2165703 (-) 855 WP_034280266.1 TlyA family RNA methyltransferase -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=986548 MHB69_RS11060 WP_024422935.1 2159903..2160706(-) (spo0A) [Bacillus sp. FSL K6-0994]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=986548 MHB69_RS11060 WP_024422935.1 2159903..2160706(-) (spo0A) [Bacillus sp. FSL K6-0994]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCAATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATCACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTCGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCAAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment