Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHI46_RS11365 | Genome accession | NZ_CP152042 |
| Coordinates | 2217834..2218169 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-1000 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2212834..2223169
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHI46_RS11345 (MHI46_11345) | gcvT | 2213321..2214418 (-) | 1098 | WP_260774197.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHI46_RS11350 (MHI46_11350) | - | 2214971..2216641 (+) | 1671 | WP_260774199.1 | DEAD/DEAH box helicase | - |
| MHI46_RS11355 (MHI46_11355) | - | 2216656..2217453 (+) | 798 | WP_260774201.1 | YqhG family protein | - |
| MHI46_RS11360 (MHI46_11360) | - | 2217636..2217800 (+) | 165 | WP_073206269.1 | anti-repressor SinI family protein | - |
| MHI46_RS11365 (MHI46_11365) | sinR | 2217834..2218169 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| MHI46_RS11370 (MHI46_11370) | - | 2218237..2219037 (-) | 801 | WP_039179929.1 | TasA family protein | - |
| MHI46_RS11375 (MHI46_11375) | - | 2219095..2219667 (-) | 573 | WP_047202287.1 | signal peptidase I | - |
| MHI46_RS11380 (MHI46_11380) | tapA | 2219719..2220246 (-) | 528 | WP_059374880.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHI46_RS11385 (MHI46_11385) | - | 2220546..2220824 (+) | 279 | WP_231120214.1 | DUF3889 domain-containing protein | - |
| MHI46_RS11390 (MHI46_11390) | - | 2220858..2221052 (-) | 195 | WP_024718846.1 | YqzE family protein | - |
| MHI46_RS11395 (MHI46_11395) | comGG | 2221112..2221495 (-) | 384 | WP_260774208.1 | competence type IV pilus minor pilin ComGG | - |
| MHI46_RS11400 (MHI46_11400) | comGF | 2221492..2222022 (-) | 531 | WP_260774210.1 | competence type IV pilus minor pilin ComGF | - |
| MHI46_RS11405 (MHI46_11405) | comGE | 2221931..2222248 (-) | 318 | WP_260774211.1 | competence type IV pilus minor pilin ComGE | - |
| MHI46_RS11410 (MHI46_11410) | comGD | 2222232..2222678 (-) | 447 | WP_260774213.1 | competence type IV pilus minor pilin ComGD | - |
| MHI46_RS11415 (MHI46_11415) | comGC | 2222671..2222964 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=986490 MHI46_RS11365 WP_024422969.1 2217834..2218169(+) (sinR) [Bacillus sp. FSL K6-1000]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=986490 MHI46_RS11365 WP_024422969.1 2217834..2218169(+) (sinR) [Bacillus sp. FSL K6-1000]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |