Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MHI46_RS11170 Genome accession   NZ_CP152042
Coordinates   2182901..2183704 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus sp. FSL K6-1000     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2177901..2188704
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI46_RS11155 (MHI46_11155) - 2180106..2180342 (+) 237 WP_039179838.1 DUF2627 domain-containing protein -
  MHI46_RS11160 (MHI46_11160) - 2180378..2181115 (-) 738 WP_064497583.1 glycerophosphodiester phosphodiesterase -
  MHI46_RS11165 (MHI46_11165) - 2181344..2182444 (-) 1101 WP_064497584.1 Rap family tetratricopeptide repeat protein -
  MHI46_RS11170 (MHI46_11170) spo0A 2182901..2183704 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  MHI46_RS11175 (MHI46_11175) spoIVB 2183990..2185267 (-) 1278 WP_039179850.1 SpoIVB peptidase -
  MHI46_RS11180 (MHI46_11180) recN 2185466..2187199 (-) 1734 WP_064497585.1 DNA repair protein RecN Machinery gene
  MHI46_RS11185 (MHI46_11185) argR 2187233..2187682 (-) 450 WP_024422938.1 transcriptional regulator ArgR -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=986488 MHI46_RS11170 WP_024422935.1 2182901..2183704(-) (spo0A) [Bacillus sp. FSL K6-1000]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=986488 MHI46_RS11170 WP_024422935.1 2182901..2183704(-) (spo0A) [Bacillus sp. FSL K6-1000]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTACATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCCTTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCTTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGCAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGGTATTTATACTTAAGAGAAGCGATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATTACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACCGCCAGCAGGGTGGAAC
GGGCGATTCGTCATGCCATTGAAGTTGCTTGGAGCAGAGGGAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGCGATTAGAGCATAGAGCTAG
CTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment