Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MHI46_RS06830 Genome accession   NZ_CP152042
Coordinates   1350437..1350898 (-) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1000     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1345437..1355898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI46_RS06810 (MHI46_06810) - 1345563..1345920 (+) 358 Protein_1287 IS3 family transposase -
  MHI46_RS06815 (MHI46_06815) - 1346054..1346629 (-) 576 WP_342503187.1 hypothetical protein -
  MHI46_RS06820 (MHI46_06820) - 1348108..1349418 (+) 1311 WP_342503188.1 MFS transporter -
  MHI46_RS06825 (MHI46_06825) - 1349492..1350400 (+) 909 WP_024424709.1 chemotaxis protein -
  MHI46_RS06830 (MHI46_06830) kre 1350437..1350898 (-) 462 WP_008356877.1 YkyB family protein Regulator
  MHI46_RS06835 (MHI46_06835) - 1351133..1351309 (+) 177 WP_180272404.1 hypothetical protein -
  MHI46_RS06840 (MHI46_06840) - 1351402..1352319 (-) 918 WP_064498384.1 AraC family transcriptional regulator -
  MHI46_RS06845 (MHI46_06845) - 1352433..1353329 (+) 897 WP_064498385.1 EamA family transporter -
  MHI46_RS06850 (MHI46_06850) - 1353511..1353726 (-) 216 WP_039178134.1 hypothetical protein -
  MHI46_RS06855 (MHI46_06855) - 1353923..1355200 (-) 1278 WP_260775889.1 MFS transporter -
  MHI46_RS06860 (MHI46_06860) - 1355274..1355771 (-) 498 WP_260775890.1 L,D-transpeptidase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=986479 MHI46_RS06830 WP_008356877.1 1350437..1350898(-) (kre) [Bacillus sp. FSL K6-1000]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=986479 MHI46_RS06830 WP_008356877.1 1350437..1350898(-) (kre) [Bacillus sp. FSL K6-1000]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGCGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACGAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTACACAAAGCCCGTCTTCAAACGACTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765

Multiple sequence alignment