Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MHI46_RS06955 Genome accession   NZ_CP152042
Coordinates   1370233..1370805 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1000     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1365233..1375805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI46_RS06925 (MHI46_06925) dapD 1365359..1366069 (+) 711 WP_060699234.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MHI46_RS06930 (MHI46_06930) - 1366152..1367282 (+) 1131 WP_341083645.1 N-acetyldiaminopimelate deacetylase -
  MHI46_RS06935 (MHI46_06935) - 1367333..1367575 (+) 243 WP_024424725.1 YkuS family protein -
  MHI46_RS06940 (MHI46_06940) - 1367598..1368407 (-) 810 WP_342503189.1 mechanosensitive ion channel family protein -
  MHI46_RS06945 (MHI46_06945) ahpA 1368679..1369221 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  MHI46_RS06950 (MHI46_06950) - 1369304..1369762 (+) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  MHI46_RS06955 (MHI46_06955) rok 1370233..1370805 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  MHI46_RS06960 (MHI46_06960) - 1370854..1371771 (-) 918 WP_144495022.1 sigmaE regulated sporulation protein -
  MHI46_RS06965 (MHI46_06965) - 1371856..1372437 (+) 582 WP_144495020.1 molybdenum cofactor guanylyltransferase -
  MHI46_RS06970 (MHI46_06970) - 1372468..1373484 (+) 1017 WP_144495018.1 thiazole biosynthesis adenylyltransferase ThiF -
  MHI46_RS06975 (MHI46_06975) glp 1373494..1374771 (+) 1278 WP_186366074.1 gephyrin-like molybdotransferase Glp -
  MHI46_RS06980 (MHI46_06980) mobB 1374753..1375277 (+) 525 WP_144495014.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  MHI46_RS06985 (MHI46_06985) - 1375274..1375765 (+) 492 WP_058837772.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=986480 MHI46_RS06955 WP_024426871.1 1370233..1370805(+) (rok) [Bacillus sp. FSL K6-1000]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=986480 MHI46_RS06955 WP_024426871.1 1370233..1370805(+) (rok) [Bacillus sp. FSL K6-1000]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGCGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAAAGAAAGACAGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCAAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTATCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment