Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   NST80_RS08455 Genome accession   NZ_CP152039
Coordinates   1825154..1825885 (-) Length   243 a.a.
NCBI ID   WP_037599160.1    Uniprot ID   -
Organism   Streptococcus sp. FSL K6-1323     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1820154..1830885
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST80_RS08430 (NST80_08430) - 1821223..1822404 (+) 1182 WP_045769072.1 NAD(P)/FAD-dependent oxidoreductase -
  NST80_RS08440 (NST80_08440) trmB 1822620..1823261 (-) 642 WP_003096317.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  NST80_RS08445 (NST80_08445) - 1823271..1824062 (-) 792 WP_118172077.1 phosphotransferase family protein -
  NST80_RS08450 (NST80_08450) pptB 1824120..1825157 (-) 1038 WP_037599161.1 ABC transporter permease Regulator
  NST80_RS08455 (NST80_08455) pptA 1825154..1825885 (-) 732 WP_037599160.1 ABC transporter ATP-binding protein Regulator
  NST80_RS08460 (NST80_08460) - 1825950..1826369 (+) 420 WP_037599159.1 HIT family protein -
  NST80_RS08465 (NST80_08465) - 1826366..1826665 (+) 300 WP_014634939.1 hypothetical protein -
  NST80_RS08470 (NST80_08470) - 1826846..1827013 (-) 168 WP_014634940.1 hypothetical protein -
  NST80_RS08475 (NST80_08475) - 1827588..1828196 (-) 609 WP_002884297.1 DUF4230 domain-containing protein -
  NST80_RS08480 (NST80_08480) - 1828214..1828339 (-) 126 WP_002884447.1 hypothetical protein -
  NST80_RS08485 (NST80_08485) - 1828775..1830880 (-) 2106 WP_037599158.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26860.11 Da        Isoelectric Point: 4.4799

>NTDB_id=986338 NST80_RS08455 WP_037599160.1 1825154..1825885(-) (pptA) [Streptococcus sp. FSL K6-1323]
MLKLEKVTGGYANIPVLKDVTFEVADGELIGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDSASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=986338 NST80_RS08455 WP_037599160.1 1825154..1825885(-) (pptA) [Streptococcus sp. FSL K6-1323]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
TGAATTGATTGGCCTCATTGGTCTTAATGGTGCCGGAAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCCT
ATGGAGGACAGATTGCTATTGATGGTTTGACCATACAGCAAGATTCGGCAAGTTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTCTATGAAGAGTTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGGATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGATTAGATGAAAAATTGGACTGGTTTCCGACTCAGTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTTAACCCCAGTCTTTTCATTGTTGATGAACCCTTC
TTGGGTTTGGATCCCTTGGCAATCTCCGACCTAATTGAGCTTTTAGCTGAGGAAAAAGCTAAGGGCAAGGCGATTCTCAT
GTCTACCCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATCTTGCATCACGGTCAAGTCTTAGCACAGG
GGACTCTCGAGGAGCTCCGTCAGACTTTTGGCGACGATAGTGCTAGTCTTAACGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

98.765

100

0.988
  pptA Streptococcus thermophilus LMD-9

96.708

100

0.967

Multiple sequence alignment