Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   NST80_RS02205 Genome accession   NZ_CP152039
Coordinates   414888..415331 (+) Length   147 a.a.
NCBI ID   WP_002885568.1    Uniprot ID   A0A0A1DW04
Organism   Streptococcus sp. FSL K6-1323     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 409888..420331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST80_RS02190 (NST80_02190) gdhA 410959..412311 (+) 1353 WP_022496250.1 NADP-specific glutamate dehydrogenase -
  NST80_RS02195 (NST80_02195) - 412970..414133 (+) 1164 WP_259666647.1 hypothetical protein -
  NST80_RS02200 (NST80_02200) - 414290..414700 (+) 411 WP_183138105.1 peptide deformylase -
  NST80_RS02205 (NST80_02205) rcrR 414888..415331 (+) 444 WP_002885568.1 MarR family transcriptional regulator Regulator
  NST80_RS02210 (NST80_02210) rcrP 415335..417149 (+) 1815 WP_183138106.1 ABC transporter ATP-binding protein Regulator
  NST80_RS02215 (NST80_02215) rcrQ 417139..418917 (+) 1779 WP_096833214.1 ABC transporter ATP-binding protein Regulator
  NST80_RS02220 (NST80_02220) - 419025..419648 (+) 624 WP_002886697.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17181.67 Da        Isoelectric Point: 9.3639

>NTDB_id=986303 NST80_RS02205 WP_002885568.1 414888..415331(+) (rcrR) [Streptococcus sp. FSL K6-1323]
MHGKDTFSEFREFINTMESRVQELGKVHGVEHLAGPQGFAVKYLSDNQDKEIFIKDIEKRLCISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKARDVKHFREAIHEQLLEGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=986303 NST80_RS02205 WP_002885568.1 414888..415331(+) (rcrR) [Streptococcus sp. FSL K6-1323]
ATGCATGGAAAAGATACTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTAGGAAAGGT
CCATGGGGTTGAGCATTTAGCTGGCCCGCAAGGATTTGCTGTCAAGTATTTGTCTGACAATCAAGATAAAGAAATCTTTA
TCAAAGACATTGAAAAAAGACTATGTATTTCTAAATCAGTGGCTAGTAATTTGGTCAAACGAATGGAAAAAAATGGTTTT
GTTGAGTTGGTGACATCGGACAAGGATAAACGCTACAAGTATGTTCATCTGACAGACTTAGGTAAAAAGAAAGCTCGAGA
TGTCAAACATTTTCGAGAGGCCATCCATGAACAGCTGTTAGAAGGTATTTCCAAAGAAGATGCTGAAACAGCCTTTCGTG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(37-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A1DW04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558

Multiple sequence alignment