Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   NST80_RS02215 Genome accession   NZ_CP152039
Coordinates   417139..418917 (+) Length   592 a.a.
NCBI ID   WP_096833214.1    Uniprot ID   -
Organism   Streptococcus sp. FSL K6-1323     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 412139..423917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST80_RS02195 (NST80_02195) - 412970..414133 (+) 1164 WP_259666647.1 hypothetical protein -
  NST80_RS02200 (NST80_02200) - 414290..414700 (+) 411 WP_183138105.1 peptide deformylase -
  NST80_RS02205 (NST80_02205) rcrR 414888..415331 (+) 444 WP_002885568.1 MarR family transcriptional regulator Regulator
  NST80_RS02210 (NST80_02210) rcrP 415335..417149 (+) 1815 WP_183138106.1 ABC transporter ATP-binding protein Regulator
  NST80_RS02215 (NST80_02215) rcrQ 417139..418917 (+) 1779 WP_096833214.1 ABC transporter ATP-binding protein Regulator
  NST80_RS02220 (NST80_02220) - 419025..419648 (+) 624 WP_002886697.1 GNAT family N-acetyltransferase -
  NST80_RS02225 (NST80_02225) - 419796..420419 (+) 624 WP_096833213.1 GTP pyrophosphokinase family protein -
  NST80_RS02230 (NST80_02230) - 420421..421098 (+) 678 WP_038675394.1 response regulator transcription factor -
  NST80_RS02235 (NST80_02235) - 421112..422335 (+) 1224 WP_183138108.1 HAMP domain-containing sensor histidine kinase -
  NST80_RS02240 (NST80_02240) pyrH 422573..423310 (+) 738 WP_002885551.1 UMP kinase -
  NST80_RS02245 (NST80_02245) frr 423325..423882 (+) 558 WP_002886708.1 ribosome recycling factor -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65144.13 Da        Isoelectric Point: 5.0198

>NTDB_id=986305 NST80_RS02215 WP_096833214.1 417139..418917(+) (rcrQ) [Streptococcus sp. FSL K6-1323]
MENKPKTSSYKRLKPYIKGFQIPFVLAIFGAIISAVITVIGPDKLKEITNTITEGITPTKMGTIPGIDLDKVASIAMTLA
VLYAISAIVGYLQSFTVATVTQRFSQRFRTAIQKKINSVPLNYFDSHSQGDTLSRVTNDVDLLGQSLSQGLGTLITSSVL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQVVVTSYNAAQESSQAFKG
LNDKLYKSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGSLTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGRIFEFLEEKDMDDESAKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNIDQGRITIDGVDTNDMKRETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIAAAKAVGVHHFITTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMAADGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=986305 NST80_RS02215 WP_096833214.1 417139..418917(+) (rcrQ) [Streptococcus sp. FSL K6-1323]
ATGGAAAATAAGCCAAAAACATCATCCTATAAACGCTTAAAACCCTATATTAAAGGTTTCCAAATTCCGTTTGTCCTTGC
GATTTTTGGAGCAATTATTTCAGCGGTCATTACAGTTATTGGACCAGATAAGCTTAAAGAAATTACCAATACTATTACTG
AAGGGATCACACCTACAAAAATGGGGACGATTCCAGGTATTGATTTGGACAAGGTAGCAAGTATTGCTATGACCTTGGCT
GTTTTATATGCGATTTCAGCCATTGTTGGTTACTTACAAAGTTTTACGGTTGCGACAGTTACACAACGCTTTTCACAACG
TTTCCGTACAGCTATCCAAAAGAAAATCAACAGTGTCCCTCTTAATTATTTCGATAGTCACTCTCAAGGGGATACCCTCT
CTCGTGTGACCAATGACGTTGACCTTTTGGGACAATCGCTTAGCCAAGGCTTAGGTACATTGATTACTTCAAGTGTTCTC
TTGGTGGCAGCCATTATTATGATGTTCTACTCAAATGTCACTATGGCTTTCACTGCGATTGGTTCTGTCTTGATAGGTTT
TGTTCTGGTAGCCTTCATCATGGGCTTCTCGCAACCCCTTTTCAAACGCCAACAAGAAAATTTGGCTAATATTAATGGTT
ATATTGAAGAAATCTACACGGGTCAAGTAGTCGTAACGAGTTACAATGCTGCTCAAGAAAGCAGTCAAGCTTTCAAGGGG
CTTAATGATAAACTTTATAAATCGATGTGGCAATCACAGTTTATCTCAGGTATTATGATGCCACTTATGATTTTCATTGG
GAACTTTGGTTATGTCATGGTCTGTCTTGTGGGTGCCATCAAAGTTATTGATGGTAGCTTGACGATTGGTGATGTGGTAG
CCTTCATGACCTATGTTCGTATCTTCTCACAACCTCTTTCTCAAATTGCACAAGGAATCACACAACTCCAGTCAGCTACT
GCAGCCATTGGTCGTATCTTTGAATTTTTGGAAGAAAAAGATATGGACGACGAGTCAGCTAAGACAGCTGAGTTGACAGA
TACTAAAGGTCAAGTAGTCTTTGACCATGTTTCCTTTGGTTATACTCCTGAAAAGACTATTATTCATGACTTTTCAGCTC
TTGCTAAGCCAGGTCAAAAGATTGCAATCGTTGGTCCAACGGGTGCTGGTAAGACGACTATTGTTAACCTGCTTATGAAG
TTCTATAACATCGACCAAGGTCGTATCACCATTGACGGTGTGGATACTAACGACATGAAACGTGAAACTGTTCATGATCA
ATTCTCTATGGTGCTTCAAGACACTTGGCTCTTTGAAGGTACTATTCGTGATAATTTGATTTACAACCAAGAGAATATTT
CTGATGAGCAAGTTATTGCTGCAGCTAAGGCTGTCGGTGTTCACCACTTCATCACCACACTTCCAAAGGGGTATGATACT
TATTTGGATGATTCTGTGACCTTATCAGTTGGTCAGAAACAGCTCTTGACCATTGCGCGTGCGCTTCTTAAGGACGCCCC
TCTTCTTATCTTGGATGAAGCGACATCATCAGTTGACACCCGAACAGAAGAATTGATTCAAAAAGCCATGGACAAGCTTA
TGGAAGGTCGGACTTCCTTTGTCATTGCTCACCGCTTATCAACCATTCGAAATGCTGACCTTATCCTTGTGATGAAAGAT
GGTAACATTATTGAACAGGGCAATCATGATGAGCTCATGGCAGCAGATGGTTTCTATGCTGATCTTTATAATAGTCAATT
TACAGAAGAAGTTGCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(371-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

69.088

100

0.691

Multiple sequence alignment