Detailed information NTG0986224

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: NYE62_RS13365
• Genome accession: NZ_CP152037
• Coordinates: 2721770..2722384 (-)
• Length: 204 a.a.
• NCBI ID: WP_020956097.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-2861
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2716770..2727384

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE62_RS13335 (NYE62_13335)	rpsT	2717073..2717339 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
NYE62_RS13340 (NYE62_13340)	holA	2717356..2718397 (-)	1042	Protein_2583	DNA polymerase III subunit delta	-
NYE62_RS13345 (NYE62_13345)	-	2718437..2718588 (-)	152	Protein_2584	hypothetical protein	-
NYE62_RS13350 (NYE62_13350)	-	2718629..2718763 (+)	135	WP_003152870.1	YqzM family protein	-
NYE62_RS13355 (NYE62_13355)	comEC	2718782..2721133 (-)	2352	WP_342496992.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NYE62_RS13360 (NYE62_13360)	-	2721134..2721703 (-)	570	WP_007408264.1	ComE operon protein 2	-
NYE62_RS13365 (NYE62_13365)	comEA	2721770..2722384 (-)	615	WP_020956097.1	helix-hairpin-helix domain-containing protein	Machinery gene
NYE62_RS13370 (NYE62_13370)	comER	2722443..2723264 (+)	822	WP_020956098.1	late competence protein ComER	-
NYE62_RS13375 (NYE62_13375)	-	2723334..2724071 (-)	738	WP_015240247.1	class I SAM-dependent methyltransferase	-
NYE62_RS13380 (NYE62_13380)	rsfS	2724068..2724424 (-)	357	WP_007408260.1	ribosome silencing factor	-
NYE62_RS13385 (NYE62_13385)	yqeK	2724442..2725002 (-)	561	WP_014418422.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
NYE62_RS13390 (NYE62_13390)	-	2724992..2725561 (-)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
NYE62_RS13395 (NYE62_13395)	yhbY	2725572..2725862 (-)	291	WP_342496993.1	ribosome assembly RNA-binding protein YhbY	-
NYE62_RS13400 (NYE62_13400)	aroE	2725856..2726698 (-)	843	WP_039254404.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22251.45 Da
• Isoelectric Point: 6.4940

>NTDB_id=986224 NYE62_RS13365 WP_020956097.1 2721770..2722384(-) (comEA) [Bacillus sp. FSL K6-2861]
MTKAMMTERLRRNLKILGACLVAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTADDKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEENRPKTAAGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREEKGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=986224 NYE62_RS13365 WP_020956097.1 2721770..2722384(-) (comEA) [Bacillus sp. FSL K6-2861]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGTAGCAGGGGCGGTTTT
TATCTGCATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCCGTGCTCGGCCAAACAGCCTCAGCAT
CCGTCGCGGACAAAAAAGACACCGCAGACGACAAGATTATGATTGATGTGAAAGGCGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGAGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CGGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCGATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCTTACCGAGAAGAAAAAGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAGAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (68-122)

• Helix-hairpin-helix motif (HHH_3) (141-202)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.115	93.627	0.544
comEA	Latilactobacillus sakei subsp. sakei 23K	31.897	100	0.363
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.071	100	0.363