Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NYE62_RS02050 Genome accession   NZ_CP152037
Coordinates   436041..436994 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus sp. FSL K6-2861     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 431041..441994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE62_RS02025 (NYE62_02025) - 431088..432521 (+) 1434 WP_179288762.1 HAMP domain-containing sensor histidine kinase -
  NYE62_RS02030 (NYE62_02030) rapC 432674..433822 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  NYE62_RS02035 (NYE62_02035) phrC 433806..433925 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NYE62_RS02040 (NYE62_02040) - 434073..434168 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  NYE62_RS02045 (NYE62_02045) - 434263..435627 (-) 1365 WP_095352403.1 aspartate kinase -
  NYE62_RS02050 (NYE62_02050) ceuB 436041..436994 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  NYE62_RS02055 (NYE62_02055) - 436984..437931 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  NYE62_RS02060 (NYE62_02060) - 437925..438683 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  NYE62_RS02065 (NYE62_02065) - 438705..439649 (+) 945 WP_144664502.1 siderophore ABC transporter substrate-binding protein -
  NYE62_RS02070 (NYE62_02070) - 439691..441115 (-) 1425 WP_095352401.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=986185 NYE62_RS02050 WP_015239156.1 436041..436994(+) (ceuB) [Bacillus sp. FSL K6-2861]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=986185 NYE62_RS02050 WP_015239156.1 436041..436994(+) (ceuB) [Bacillus sp. FSL K6-2861]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGGAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATTGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGGTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACTTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment