Detailed information NTG0986147

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: NYE42_RS13210
• Genome accession: NZ_CP152036
• Coordinates: 2696351..2696965 (-)
• Length: 204 a.a.
• NCBI ID: WP_020956097.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-2865
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2691351..2701965

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE42_RS13180 (NYE42_13160)	rpsT	2691654..2691920 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
NYE42_RS13185 (NYE42_13165)	holA	2691937..2692978 (-)	1042	Protein_2552	DNA polymerase III subunit delta	-
NYE42_RS13190 (NYE42_13170)	-	2693018..2693169 (-)	152	Protein_2553	hypothetical protein	-
NYE42_RS13195 (NYE42_13175)	-	2693210..2693344 (+)	135	WP_003152870.1	YqzM family protein	-
NYE42_RS13200 (NYE42_13180)	comEC	2693363..2695714 (-)	2352	WP_342496992.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NYE42_RS13205 (NYE42_13185)	-	2695715..2696284 (-)	570	WP_007408264.1	ComE operon protein 2	-
NYE42_RS13210 (NYE42_13190)	comEA	2696351..2696965 (-)	615	WP_020956097.1	helix-hairpin-helix domain-containing protein	Machinery gene
NYE42_RS13215 (NYE42_13195)	comER	2697024..2697845 (+)	822	WP_039254409.1	late competence protein ComER	-
NYE42_RS13220 (NYE42_13200)	-	2697914..2698651 (-)	738	WP_015417856.1	class I SAM-dependent methyltransferase	-
NYE42_RS13225 (NYE42_13205)	rsfS	2698648..2699004 (-)	357	WP_007408260.1	ribosome silencing factor	-
NYE42_RS13230 (NYE42_13210)	yqeK	2699022..2699582 (-)	561	WP_014418422.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
NYE42_RS13235 (NYE42_13215)	-	2699572..2700141 (-)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
NYE42_RS13240 (NYE42_13220)	yhbY	2700152..2700442 (-)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-
NYE42_RS13245 (NYE42_13225)	aroE	2700436..2701278 (-)	843	WP_352426508.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22251.45 Da
• Isoelectric Point: 6.4940

>NTDB_id=986147 NYE42_RS13210 WP_020956097.1 2696351..2696965(-) (comEA) [Bacillus sp. FSL K6-2865]
MTKAMMTERLRRNLKILGACLVAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTADDKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEENRPKTAAGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREEKGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=986147 NYE42_RS13210 WP_020956097.1 2696351..2696965(-) (comEA) [Bacillus sp. FSL K6-2865]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGTAGCAGGGGCGGTTTT
TATCTGCATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCCGTGCTCGGCCAAACAGCCTCAGCAT
CCGTCGCGGACAAAAAAGACACCGCAGACGACAAGATTATGATTGATGTGAAAGGCGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGAGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CGGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCGATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCTTACCGAGAAGAAAAAGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAGAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (68-122)

• Helix-hairpin-helix motif (HHH_3) (141-202)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.115	93.627	0.544
comEA	Latilactobacillus sakei subsp. sakei 23K	31.897	100	0.363
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.071	100	0.363