Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   NYE42_RS01805 Genome accession   NZ_CP152036
Coordinates   369846..370244 (-) Length   132 a.a.
NCBI ID   WP_014416873.1    Uniprot ID   I2C179
Organism   Bacillus sp. FSL K6-2865     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 364846..375244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE42_RS01780 (NYE42_01780) - 365017..366219 (+) 1203 WP_352426720.1 GTP-binding protein -
  NYE42_RS01785 (NYE42_01785) - 366284..367420 (+) 1137 WP_352426721.1 zinc-dependent alcohol dehydrogenase -
  NYE42_RS01790 (NYE42_01790) - 367435..367869 (+) 435 WP_352426722.1 RDD family protein -
  NYE42_RS01795 (NYE42_01795) - 367942..368265 (+) 324 WP_040221546.1 YckD family protein -
  NYE42_RS01800 (NYE42_01800) - 368369..369805 (+) 1437 WP_352426723.1 family 1 glycosylhydrolase -
  NYE42_RS01805 (NYE42_01805) nin/comJ 369846..370244 (-) 399 WP_014416873.1 competence protein ComJ Regulator
  NYE42_RS01810 (NYE42_01810) nucA/comI 370265..370702 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  NYE42_RS01815 (NYE42_01815) hxlB 371059..371616 (-) 558 WP_007409354.1 6-phospho-3-hexuloisomerase -
  NYE42_RS01820 (NYE42_01820) hxlA 371613..372248 (-) 636 WP_031378686.1 3-hexulose-6-phosphate synthase -
  NYE42_RS01825 (NYE42_01825) - 372481..372843 (+) 363 WP_012116770.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14893.89 Da        Isoelectric Point: 4.7846

>NTDB_id=986103 NYE42_RS01805 WP_014416873.1 369846..370244(-) (nin/comJ) [Bacillus sp. FSL K6-2865]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=986103 NYE42_RS01805 WP_014416873.1 369846..370244(-) (nin/comJ) [Bacillus sp. FSL K6-2865]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTTCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C179

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.515

100

0.765

Multiple sequence alignment