Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHB83_RS16115 | Genome accession | NZ_CP152034 |
| Coordinates | 3178539..3178874 (+) | Length | 111 a.a. |
| NCBI ID | WP_012010555.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-3149 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3173539..3183874
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHB83_RS16095 (MHB83_16095) | gcvT | 3174016..3175113 (-) | 1098 | WP_268458397.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHB83_RS16100 (MHB83_16100) | - | 3175676..3177346 (+) | 1671 | WP_342496472.1 | SNF2-related protein | - |
| MHB83_RS16105 (MHB83_16105) | - | 3177361..3178158 (+) | 798 | WP_342496473.1 | YqhG family protein | - |
| MHB83_RS16110 (MHB83_16110) | - | 3178341..3178505 (+) | 165 | WP_003217357.1 | anti-repressor SinI family protein | - |
| MHB83_RS16115 (MHB83_16115) | sinR | 3178539..3178874 (+) | 336 | WP_012010555.1 | transcriptional regulator SinR | Regulator |
| MHB83_RS16120 (MHB83_16120) | - | 3178942..3179742 (-) | 801 | WP_003217403.1 | TasA family protein | - |
| MHB83_RS16125 (MHB83_16125) | - | 3179800..3180372 (-) | 573 | WP_342496474.1 | signal peptidase I | - |
| MHB83_RS16130 (MHB83_16130) | tapA | 3180424..3180951 (-) | 528 | WP_137054980.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHB83_RS16135 (MHB83_16135) | - | 3181251..3181529 (+) | 279 | WP_003217457.1 | DUF3889 domain-containing protein | - |
| MHB83_RS16140 (MHB83_16140) | - | 3181563..3181757 (-) | 195 | WP_034620826.1 | YqzE family protein | - |
| MHB83_RS16145 (MHB83_16145) | comGG | 3181817..3182200 (-) | 384 | WP_137054979.1 | competence type IV pilus minor pilin ComGG | - |
| MHB83_RS16150 (MHB83_16150) | comGF | 3182197..3182697 (-) | 501 | WP_137054978.1 | competence type IV pilus minor pilin ComGF | - |
| MHB83_RS16155 (MHB83_16155) | comGE | 3182636..3182953 (-) | 318 | WP_003217390.1 | competence type IV pilus minor pilin ComGE | - |
| MHB83_RS16160 (MHB83_16160) | comGD | 3182937..3183383 (-) | 447 | WP_003217424.1 | competence type IV pilus minor pilin ComGD | - |
| MHB83_RS16165 (MHB83_16165) | comGC | 3183376..3183669 (-) | 294 | WP_003217322.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 13001.59 Da Isoelectric Point: 5.2831
>NTDB_id=986024 MHB83_RS16115 WP_012010555.1 3178539..3178874(+) (sinR) [Bacillus sp. FSL K6-3149]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=986024 MHB83_RS16115 WP_012010555.1 3178539..3178874(+) (sinR) [Bacillus sp. FSL K6-3149]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |