Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MHI60_RS15270 Genome accession   NZ_CP152032
Coordinates   2984996..2985799 (+) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus sp. FSL K6-3200     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2979996..2990799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI60_RS15250 (MHI60_15250) - 2979997..2980851 (+) 855 WP_095408976.1 TlyA family RNA methyltransferase -
  MHI60_RS15255 (MHI60_15255) argR 2981017..2981466 (+) 450 WP_024422938.1 transcriptional regulator ArgR -
  MHI60_RS15260 (MHI60_15260) recN 2981500..2983233 (+) 1734 WP_111292270.1 DNA repair protein RecN Machinery gene
  MHI60_RS15265 (MHI60_15265) spoIVB 2983432..2984709 (+) 1278 WP_048239243.1 SpoIVB peptidase -
  MHI60_RS15270 (MHI60_15270) spo0A 2984996..2985799 (+) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  MHI60_RS15275 (MHI60_15275) - 2986256..2987356 (+) 1101 WP_144484601.1 Rap family tetratricopeptide repeat protein -
  MHI60_RS15280 (MHI60_15280) - 2987583..2988320 (+) 738 WP_048239245.1 glycerophosphodiester phosphodiesterase -
  MHI60_RS15285 (MHI60_15285) - 2988357..2988593 (-) 237 WP_144484599.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=985909 MHI60_RS15270 WP_024422935.1 2984996..2985799(+) (spo0A) [Bacillus sp. FSL K6-3200]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=985909 MHI60_RS15270 WP_024422935.1 2984996..2985799(+) (spo0A) [Bacillus sp. FSL K6-3200]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTGTTGACAGAGTACATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACGAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCTATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATC
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCGATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATCACTAAAGTGTTGTACCCAGACATTGCGAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCCGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment