Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   MHI60_RS17710 Genome accession   NZ_CP152032
Coordinates   3444713..3445093 (-) Length   126 a.a.
NCBI ID   WP_223250982.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-3200     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3439713..3450093
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI60_RS17675 (MHI60_17675) - 3440292..3440522 (-) 231 WP_048240230.1 DUF896 domain-containing protein -
  MHI60_RS17680 (MHI60_17680) - 3440592..3441239 (-) 648 WP_073979991.1 recombinase family protein -
  MHI60_RS17685 (MHI60_17685) yneA 3441257..3441568 (-) 312 WP_024425130.1 cell division suppressor protein YneA -
  MHI60_RS17690 (MHI60_17690) lexA 3441728..3442348 (+) 621 WP_034283422.1 transcriptional repressor LexA -
  MHI60_RS17695 (MHI60_17695) - 3442396..3442845 (-) 450 WP_095408610.1 hypothetical protein -
  MHI60_RS17700 (MHI60_17700) - 3443144..3443686 (+) 543 WP_095408609.1 IseA DL-endopeptidase inhibitor family protein -
  MHI60_RS17705 (MHI60_17705) - 3443718..3444566 (-) 849 WP_111292992.1 STAS domain-containing protein -
  MHI60_RS17710 (MHI60_17710) nucA/comI 3444713..3445093 (-) 381 WP_223250982.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MHI60_RS17715 (MHI60_17715) - 3445328..3446236 (-) 909 WP_039178896.1 trypsin-like serine protease -
  MHI60_RS17720 (MHI60_17720) - 3446431..3449574 (-) 3144 WP_144485318.1 cytochrome P450 -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13713.38 Da        Isoelectric Point: 8.5068

>NTDB_id=985911 MHI60_RS17710 WP_223250982.1 3444713..3445093(-) (nucA/comI) [Bacillus sp. FSL K6-3200]
MGTLLGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQDAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=985911 MHI60_RS17710 WP_223250982.1 3444713..3445093(-) (nucA/comI) [Bacillus sp. FSL K6-3200]
ATGGGCACGTTGTTAGGTGGATTTGGAGAGAAGCAGGCAGCAAAAGGTGCTGATCGATATGATCATGTCGTTCAATTTCC
AAAGGAACGATACCCTGAAACAGGCAGTCATATTCAAGATGCCATTCGAAAAGGGCATTCAGATGTTTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCG
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTTCAATATGTCAGTCCATCTGATAATAGGGGAGCAGGCTCATG
GGTCGGCCATCAAATCAGCGGGTTTCCTGATGGAAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

58.824

94.444

0.556

Multiple sequence alignment