Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MHI60_RS11755 Genome accession   NZ_CP152032
Coordinates   2334653..2335294 (+) Length   213 a.a.
NCBI ID   WP_144472265.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-3200     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2329653..2340294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI60_RS11730 (MHI60_11730) - 2329970..2330326 (-) 357 WP_144483390.1 inner spore coat protein -
  MHI60_RS11735 (MHI60_11735) degQ 2330832..2330972 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  MHI60_RS11740 (MHI60_11740) - 2331124..2332038 (+) 915 WP_144483387.1 polyprenyl synthetase family protein -
  MHI60_RS11745 (MHI60_11745) comX 2332035..2332202 (+) 168 WP_186318690.1 competence pheromone ComX -
  MHI60_RS11750 (MHI60_11750) comP 2332260..2334572 (+) 2313 WP_144483383.1 ATP-binding protein Regulator
  MHI60_RS11755 (MHI60_11755) comA 2334653..2335294 (+) 642 WP_144472265.1 response regulator transcription factor Regulator
  MHI60_RS11760 (MHI60_11760) - 2335318..2335707 (+) 390 WP_095409463.1 hotdog fold thioesterase -
  MHI60_RS11765 (MHI60_11765) mnhG 2335812..2336186 (-) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  MHI60_RS11770 (MHI60_11770) - 2336170..2336451 (-) 282 WP_039181117.1 Na(+)/H(+) antiporter subunit F1 -
  MHI60_RS11775 (MHI60_11775) - 2336451..2336930 (-) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  MHI60_RS11780 (MHI60_11780) - 2336937..2338415 (-) 1479 WP_144483380.1 Na+/H+ antiporter subunit D -
  MHI60_RS11785 (MHI60_11785) - 2338408..2338749 (-) 342 WP_048237322.1 Na(+)/H(+) antiporter subunit C -
  MHI60_RS11790 (MHI60_11790) - 2338749..2339180 (-) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24153.53 Da        Isoelectric Point: 4.5634

>NTDB_id=985895 MHI60_RS11755 WP_144472265.1 2334653..2335294(+) (comA) [Bacillus sp. FSL K6-3200]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILENNQQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHDLLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=985895 MHI60_RS11755 WP_144472265.1 2334653..2335294(+) (comA) [Bacillus sp. FSL K6-3200]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATTTTAGAATCAGACCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGACGTGATTTTGA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAGCAAATCTTAGAAAACAACCAGCAAGTAAAAATTATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCTATTCGGGCTGGATTACACGGTGCAATTAGTAAAACAGA
GACGAAAGACAAAATTATTGAATACATACACCGCACATTACAAGGAGAAGTTGTCATTCAGCTGTCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAGCCAGAACAGGCGCAGCAGACTGATCACGACCTCTTAACCGAACGGGAGTGTTTGATC
CTTAGAGAAGTAGAAAAAGGATACACGAACCAGGAGATTGCCGATGTGCTTCATTTGAGCAAACGGTCAATTGAGTACAG
TTTGACATCCATCTTTAATAAGCTGAATGTTGGATCTCGTACAGAAGCGGTGTTAATTGCCAAGTCTGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.963

100

0.723

Multiple sequence alignment