Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MHH54_RS14645 Genome accession   NZ_CP152030
Coordinates   2867778..2868419 (-) Length   213 a.a.
NCBI ID   WP_003213500.1    Uniprot ID   A0AB34QVB6
Organism   Bacillus sp. FSL K6-4563     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2862778..2873419
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH54_RS14610 (MHH54_14610) - 2863889..2864320 (+) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -
  MHH54_RS14615 (MHH54_14615) - 2864320..2864661 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  MHH54_RS14620 (MHH54_14620) - 2864654..2866132 (+) 1479 WP_034620106.1 Na+/H+ antiporter subunit D -
  MHH54_RS14625 (MHH54_14625) - 2866139..2866618 (+) 480 WP_003213059.1 Na+/H+ antiporter subunit E -
  MHH54_RS14630 (MHH54_14630) - 2866618..2866899 (+) 282 WP_003213177.1 Na(+)/H(+) antiporter subunit F1 -
  MHH54_RS14635 (MHH54_14635) mnhG 2866883..2867257 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  MHH54_RS14640 (MHH54_14640) - 2867365..2867754 (-) 390 WP_003213775.1 hotdog fold thioesterase -
  MHH54_RS14645 (MHH54_14645) comA 2867778..2868419 (-) 642 WP_003213500.1 response regulator transcription factor Regulator
  MHH54_RS14650 (MHH54_14650) comP 2868500..2870791 (-) 2292 WP_106036183.1 ATP-binding protein Regulator
  MHH54_RS14655 (MHH54_14655) comX 2870798..2870977 (-) 180 WP_034620107.1 competence pheromone ComX -
  MHH54_RS14660 (MHH54_14660) - 2870955..2871878 (-) 924 WP_003212977.1 polyprenyl synthetase family protein -
  MHH54_RS14665 (MHH54_14665) degQ 2872030..2872170 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  MHH54_RS14670 (MHH54_14670) - 2872676..2873029 (+) 354 WP_034620108.1 hypothetical protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24155.54 Da        Isoelectric Point: 4.5204

>NTDB_id=985807 MHH54_RS14645 WP_003213500.1 2867778..2868419(-) (comA) [Bacillus sp. FSL K6-4563]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNQQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQETDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=985807 MHH54_RS14645 WP_003213500.1 2867778..2868419(-) (comA) [Bacillus sp. FSL K6-4563]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGATCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATTTTGA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAACAAATTCTAGAAACCAACCAACAAGTGAAAATCATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCCATTCGGGCTGGATTGCACGGTGCAATTAGTAAAACAGA
GACAAAAGACAAAATTATTGAATACATACACCGCACATTGCAAGGAGAAGTTGTCATTCAGCTATCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAGCCAGAACAGGCGCAGGAGACCGATCACGAGCTGTTAACAGAGCGAGAGTGTTTGATC
CTCAGAGAAGTGGAAAAAGGATACACGAACCAAGAGATTGCCGATGTGCTGCATTTGAGCAAACGCTCGATTGAATACAG
CTTGACGTCCATCTTTAATAAGCTGAATGTTGGCTCTCGAACCGAAGCGGTGTTAATTGCAAAATCTGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.028

100

0.714

Multiple sequence alignment