Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MHH54_RS11115 Genome accession   NZ_CP152030
Coordinates   2222587..2223390 (-) Length   267 a.a.
NCBI ID   WP_003215740.1    Uniprot ID   A0AB34QSQ5
Organism   Bacillus sp. FSL K6-4563     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2217587..2228390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH54_RS11100 (MHH54_11100) - 2219797..2220033 (+) 237 WP_050943781.1 DUF2627 domain-containing protein -
  MHH54_RS11105 (MHH54_11105) - 2220068..2220805 (-) 738 WP_342500254.1 glycerophosphodiester phosphodiesterase -
  MHH54_RS11110 (MHH54_11110) - 2221031..2222131 (-) 1101 WP_003215741.1 Rap family tetratricopeptide repeat protein -
  MHH54_RS11115 (MHH54_11115) spo0A 2222587..2223390 (-) 804 WP_003215740.1 sporulation transcription factor Spo0A Regulator
  MHH54_RS11120 (MHH54_11120) spoIVB 2223676..2224953 (-) 1278 WP_003215755.1 SpoIVB peptidase -
  MHH54_RS11125 (MHH54_11125) recN 2225152..2226888 (-) 1737 WP_137054990.1 DNA repair protein RecN Machinery gene
  MHH54_RS11130 (MHH54_11130) argR 2226922..2227371 (-) 450 WP_003215836.1 transcriptional regulator ArgR -
  MHH54_RS11135 (MHH54_11135) - 2227531..2228385 (-) 855 WP_106029159.1 TlyA family RNA methyltransferase -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29946.45 Da        Isoelectric Point: 6.3914

>NTDB_id=985793 MHH54_RS11115 WP_003215740.1 2222587..2223390(-) (spo0A) [Bacillus sp. FSL K6-4563]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNDMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRRNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=985793 MHH54_RS11115 WP_003215740.1 2222587..2223390(-) (spo0A) [Bacillus sp. FSL K6-4563]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTAACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGACATGACCAAACAG
CCAAGTGTGATTATGCTAACGGCGTTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATCTAGGCGCATCTTATTTCAT
CTTAAAGCCATTTGATATGGAAAACCTAGTCGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCACCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGAAACAAACCTGAACCGAAACGCAGAAACTTAGATGCGAGCATTACAACGATT
ATTCATGAGATTGGCGTCCCGGCTCATATTAAAGGTTACTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGACAT
CGAGCTTCTCGGAAGCATCACAAAAGTGTTGTATCCAGACATCGCGAAGAAATTTAACACGACCGCGAGCAGAGTAGAAC
GAGCGATTCGTCATGCGATTGAAGTGGCTTGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACAGTC
AGCATGTCTAAAGCAAAACCAACCAATTCTGAATTTATCGCAATGGTGGCTGATCGTCTGCGCTTAGAGCATAGAGCAAG
CTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment