Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHI41_RS11355 | Genome accession | NZ_CP152023 |
| Coordinates | 2228050..2228385 (+) | Length | 111 a.a. |
| NCBI ID | WP_017357978.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL M7-0307 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2223050..2233385
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHI41_RS11335 (MHI41_11335) | gcvT | 2223526..2224623 (-) | 1098 | WP_017357975.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHI41_RS11340 (MHI41_11340) | - | 2225185..2226855 (+) | 1671 | WP_342494200.1 | SNF2-related protein | - |
| MHI41_RS11345 (MHI41_11345) | - | 2226870..2227667 (+) | 798 | WP_035702783.1 | YqhG family protein | - |
| MHI41_RS11350 (MHI41_11350) | - | 2227852..2228016 (+) | 165 | WP_008342197.1 | anti-repressor SinI family protein | - |
| MHI41_RS11355 (MHI41_11355) | sinR | 2228050..2228385 (+) | 336 | WP_017357978.1 | helix-turn-helix domain-containing protein | Regulator |
| MHI41_RS11360 (MHI41_11360) | - | 2228453..2229253 (-) | 801 | WP_035390805.1 | TasA family protein | - |
| MHI41_RS11365 (MHI41_11365) | - | 2229312..2229884 (-) | 573 | WP_041091749.1 | signal peptidase I | - |
| MHI41_RS11370 (MHI41_11370) | tapA | 2229934..2230461 (-) | 528 | WP_046527018.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHI41_RS11375 (MHI41_11375) | - | 2230714..2231040 (+) | 327 | WP_017367590.1 | DUF3889 domain-containing protein | - |
| MHI41_RS11380 (MHI41_11380) | - | 2231074..2231274 (-) | 201 | WP_046343970.1 | YqzE family protein | - |
| MHI41_RS11385 (MHI41_11385) | comGG | 2231335..2231718 (-) | 384 | WP_272511702.1 | competence type IV pilus minor pilin ComGG | - |
| MHI41_RS11390 (MHI41_11390) | comGF | 2231715..2232212 (-) | 498 | WP_065460694.1 | competence type IV pilus minor pilin ComGF | - |
| MHI41_RS11395 (MHI41_11395) | comGE | 2232154..2232468 (-) | 315 | WP_065460696.1 | competence type IV pilus minor pilin ComGE | - |
| MHI41_RS11400 (MHI41_11400) | comGD | 2232452..2232898 (-) | 447 | WP_073413947.1 | competence type IV pilus minor pilin ComGD | - |
| MHI41_RS11405 (MHI41_11405) | comGC | 2232891..2233184 (-) | 294 | WP_008342186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12936.47 Da Isoelectric Point: 4.8062
>NTDB_id=985393 MHI41_RS11355 WP_017357978.1 2228050..2228385(+) (sinR) [Bacillus sp. FSL M7-0307]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=985393 MHI41_RS11355 WP_017357978.1 2228050..2228385(+) (sinR) [Bacillus sp. FSL M7-0307]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |