Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MHI08_RS14545 Genome accession   NZ_CP152022
Coordinates   2810272..2810913 (-) Length   213 a.a.
NCBI ID   WP_024423322.1    Uniprot ID   A0AAP7QNQ1
Organism   Bacillus sp. FSL M7-0791     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2805272..2815913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI08_RS14510 (MHI08_14510) - 2806396..2806827 (+) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -
  MHI08_RS14515 (MHI08_14515) - 2806827..2807168 (+) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  MHI08_RS14520 (MHI08_14520) - 2807161..2808639 (+) 1479 WP_024425940.1 Na+/H+ antiporter subunit D -
  MHI08_RS14525 (MHI08_14525) - 2808646..2809125 (+) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  MHI08_RS14530 (MHI08_14530) - 2809125..2809406 (+) 282 WP_039181117.1 Na(+)/H(+) antiporter subunit F1 -
  MHI08_RS14535 (MHI08_14535) mnhG 2809390..2809764 (+) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  MHI08_RS14540 (MHI08_14540) - 2809859..2810248 (-) 390 WP_047203310.1 hotdog fold thioesterase -
  MHI08_RS14545 (MHI08_14545) comA 2810272..2810913 (-) 642 WP_024423322.1 response regulator transcription factor Regulator
  MHI08_RS14550 (MHI08_14550) comP 2810994..2813306 (-) 2313 WP_107163122.1 ATP-binding protein Regulator
  MHI08_RS14555 (MHI08_14555) comX 2813354..2813524 (-) 171 WP_181286101.1 competence pheromone ComX -
  MHI08_RS14560 (MHI08_14560) - 2813521..2814435 (-) 915 WP_269773583.1 polyprenyl synthetase family protein -
  MHI08_RS14565 (MHI08_14565) degQ 2814587..2814727 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  MHI08_RS14570 (MHI08_14570) - 2815233..2815589 (+) 357 WP_052773115.1 hypothetical protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24149.54 Da        Isoelectric Point: 4.6344

>NTDB_id=985344 MHI08_RS14545 WP_024423322.1 2810272..2810913(-) (comA) [Bacillus sp. FSL M7-0791]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNHQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHDLLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=985344 MHI08_RS14545 WP_024423322.1 2810272..2810913(-) (comA) [Bacillus sp. FSL M7-0791]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGACCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATTTTAA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATAGCGAAACAAATTTTAGAAACCAACCATCAAGTGAAAATTATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCTATTCGGGCTGGATTACACGGTGCAATTAGTAAAACAGA
GACGAAAGACAAAATTATTGAATACATACACCGGACATTGCAAGGAGAAGTTGTCATTCAGCTGTCCTATTTAAAGAAAT
TGATTTCACAGCAGCAAGAAAAGCCAGAACAAGCGCAGCAGACTGACCACGATCTCTTAACGGAACGGGAGTGTTTGATC
CTTAGAGAAGTGGAAAAAGGATACACGAACCAGGAGATTGCCGATGTGCTTCATTTGAGCAAACGGTCAATTGAGTACAG
TTTGACATCCATCTTTAATAAGCTGAATGTTGGATCTCGTACAGAAGCGGTGTTAATTGCCAAGTCTGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.963

100

0.723

Multiple sequence alignment