Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHI08_RS11275 | Genome accession | NZ_CP152022 |
| Coordinates | 2208758..2209093 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL M7-0791 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2203758..2214093
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHI08_RS11255 (MHI08_11255) | gcvT | 2204237..2205334 (-) | 1098 | WP_268437367.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHI08_RS11260 (MHI08_11260) | - | 2205896..2207566 (+) | 1671 | WP_024427994.1 | SNF2-related protein | - |
| MHI08_RS11265 (MHI08_11265) | - | 2207581..2208378 (+) | 798 | WP_024427993.1 | YqhG family protein | - |
| MHI08_RS11270 (MHI08_11270) | - | 2208560..2208724 (+) | 165 | WP_317221938.1 | anti-repressor SinI family protein | - |
| MHI08_RS11275 (MHI08_11275) | sinR | 2208758..2209093 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| MHI08_RS11280 (MHI08_11280) | - | 2209161..2209961 (-) | 801 | WP_098677431.1 | TasA family protein | - |
| MHI08_RS11285 (MHI08_11285) | - | 2210016..2210588 (-) | 573 | WP_024422971.1 | signal peptidase I | - |
| MHI08_RS11290 (MHI08_11290) | tapA | 2210641..2211168 (-) | 528 | WP_234107214.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHI08_RS11295 (MHI08_11295) | - | 2211468..2211746 (+) | 279 | WP_268415647.1 | DUF3889 domain-containing protein | - |
| MHI08_RS11300 (MHI08_11300) | - | 2211781..2211975 (-) | 195 | WP_056767455.1 | YqzE family protein | - |
| MHI08_RS11305 (MHI08_11305) | comGG | 2212035..2212418 (-) | 384 | WP_103131951.1 | competence type IV pilus minor pilin ComGG | - |
| MHI08_RS11310 (MHI08_11310) | comGF | 2212415..2212942 (-) | 528 | WP_311164128.1 | competence type IV pilus minor pilin ComGF | - |
| MHI08_RS11315 (MHI08_11315) | comGE | 2212854..2213168 (-) | 315 | WP_087978326.1 | competence type IV pilus minor pilin ComGE | - |
| MHI08_RS11320 (MHI08_11320) | comGD | 2213152..2213598 (-) | 447 | WP_342499627.1 | competence type IV pilus minor pilin ComGD | - |
| MHI08_RS11325 (MHI08_11325) | comGC | 2213591..2213884 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=985332 MHI08_RS11275 WP_024422969.1 2208758..2209093(+) (sinR) [Bacillus sp. FSL M7-0791]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=985332 MHI08_RS11275 WP_024422969.1 2208758..2209093(+) (sinR) [Bacillus sp. FSL M7-0791]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |