Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MHI08_RS11080 Genome accession   NZ_CP152022
Coordinates   2174023..2174826 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus sp. FSL M7-0791     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2169023..2179826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI08_RS11065 (MHI08_11065) - 2171226..2171462 (+) 237 WP_024422931.1 DUF2627 domain-containing protein -
  MHI08_RS11070 (MHI08_11070) - 2171499..2172236 (-) 738 WP_024422932.1 glycerophosphodiester phosphodiesterase -
  MHI08_RS11075 (MHI08_11075) - 2172466..2173566 (-) 1101 WP_024422933.1 Rap family tetratricopeptide repeat protein -
  MHI08_RS11080 (MHI08_11080) spo0A 2174023..2174826 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  MHI08_RS11085 (MHI08_11085) spoIVB 2175113..2176390 (-) 1278 WP_025092993.1 SpoIVB peptidase -
  MHI08_RS11090 (MHI08_11090) recN 2176590..2178323 (-) 1734 WP_025092992.1 DNA repair protein RecN Machinery gene
  MHI08_RS11095 (MHI08_11095) argR 2178357..2178806 (-) 450 WP_024422938.1 transcriptional regulator ArgR -
  MHI08_RS11100 (MHI08_11100) - 2178970..2179824 (-) 855 WP_025092991.1 TlyA family RNA methyltransferase -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=985330 MHI08_RS11080 WP_024422935.1 2174023..2174826(-) (spo0A) [Bacillus sp. FSL M7-0791]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=985330 MHI08_RS11080 WP_024422935.1 2174023..2174826(-) (spo0A) [Bacillus sp. FSL M7-0791]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCAATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATCACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTCGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment