Detailed information NTG0985330

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: ACN9LG_RS17730
• Genome accession: NZ_CP184114
• Coordinates: 3587759..3588751 (-)
• Length: 330 a.a.
• NCBI ID: WP_000081550.1
• Uniprot ID: A0A370V765
• Organism: Escherichia coli strain AZ 191
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 3582759..3593751

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN9LG_RS17710 (ACN9LG_17710)	ygbM	3583397..3584173 (+)	777	WP_001136914.1	HPr family phosphocarrier protein	-
ACN9LG_RS17715 (ACN9LG_17715)	ygbN	3584262..3585626 (+)	1365	WP_000104433.1	GntP family transporter	-
ACN9LG_RS17720 (ACN9LG_17720)	-	3585769..3586812 (-)	1044	WP_001161583.1	MBL fold metallo-hydrolase	-
ACN9LG_RS17725 (ACN9LG_17725)	-	3587037..3587588 (+)	552	WP_001179444.1	flavodoxin family protein	-
ACN9LG_RS17730 (ACN9LG_17730)	rpoS	3587759..3588751 (-)	993	WP_000081550.1	RNA polymerase sigma factor RpoS	Regulator
ACN9LG_RS17735 (ACN9LG_17735)	nlpD	3588814..3589908 (-)	1095	WP_306278776.1	murein hydrolase activator NlpD	-
ACN9LG_RS17740 (ACN9LG_17740)	pcm	3590093..3590719 (-)	627	WP_000254708.1	protein-L-isoaspartate O-methyltransferase	-
ACN9LG_RS17745 (ACN9LG_17745)	surE	3590713..3591474 (-)	762	WP_001295182.1	5'/3'-nucleotidase SurE	-
ACN9LG_RS17750 (ACN9LG_17750)	truD	3591455..3592504 (-)	1050	WP_000568920.1	tRNA pseudouridine(13) synthase TruD	-
ACN9LG_RS17755 (ACN9LG_17755)	ispF	3592501..3592980 (-)	480	WP_001219237.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
ACN9LG_RS17760 (ACN9LG_17760)	ispD	3592980..3593690 (-)	711	WP_000246149.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-

Sequence

Protein

• Length: 330 a.a.
• Molecular weight: 37972.84 Da
• Isoelectric Point: 4.5597

>NTDB_id=985330 ACN9LG_RS17730 WP_000081550.1 3587759..3588751(-) (rpoS) [Escherichia coli strain AZ 191]
MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFA
RRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQ
GLNIEALFRE

Nucleotide

• Length: 993 bp

>NTDB_id=985330 ACN9LG_RS17730 WP_000081550.1 3587759..3588751(-) (rpoS) [Escherichia coli strain AZ 191]
ATGAGTCAGAATACGCTGAAAGTTCATGATTTAAATGAAGATGCGGAATTTGATGAGAACGGAGTTGAGGTTTTTGACGA
AAAGGCCTTAGTAGAAGAGGAACCCAGTGATAACGATTTGGCCGAAGAGGAACTGTTATCGCAGGGAGCCACACAGCGTG
TGCTGGACGCGACTCAGCTTTACCTTGGTGAGATTGGTTATTCACCACTGTTAACGGCCGAAGAAGAAGTTTATTTTGCG
CGTCGCGCACTGCGTGGAGATGTCGCCTCTCGCCGCCGGATGATCGAGAGTAACTTGCGTCTGGTGGTAAAAATTGCCCG
CCGTTATGGCAATCGTGGTCTGGCGTTGCTGGACCTGATCGAAGAGGGCAACCTGGGGCTGATCCGCGCGGTAGAGAAGT
TTGACCCGGAACGTGGTTTCCGCTTCTCAACATACGCAACCTGGTGGATTCGCCAGACGATCGAACGGGCGATTATGAAC
CAAACCCGTACTATTCGTTTGCCGATTCACATCGTAAAGGAGCTGAACGTTTACCTGCGAACCGCACGTGAGTTGTCCCA
TAAGCTGGACCACGAACCAAGTGCGGAAGAGATCGCAGAGCAACTGGATAAGCCAGTTGATGACGTCAGCCGTATGCTTC
GTCTTAACGAGCGCATTACCTCGGTAGACACCCCGCTGGGTGGTGATTCCGAAAAAGCATTGCTGGACATCCTGGCCGAT
GAAAAAGAGAATGGTCCGGAAGATACCACGCAAGATGACGATATGAAGCAGAGCATCGTCAAATGGCTGTTCGAGCTGAA
CGCCAAACAGCGTGAAGTGCTGGCACGTCGATTCGGTTTGCTGGGGTACGAAGCGGCAACACTGGAAGATGTAGGTCGTG
AAATTGGCCTCACCCGTGAACGTGTTCGCCAGATTCAGGTTGAAGGCCTGCGCCGTTTGCGCGAAATCCTGCAAACGCAG
GGGCTGAATATCGAAGCGCTGTTCCGCGAATAA

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (174-248)

• Sigma-70 region 2 (Sigma70_r2) (94-163)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (56-88)

• Sigma-70, region 4 (Sigma70_r4) (262-315)

3D structure

• AlphaFold DB: A0A370V765

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	73.065	97.879	0.715