Detailed information NTG0984871

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NYE28_RS02010
• Genome accession: NZ_CP152013
• Coordinates: 396391..397539 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R5-0443
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 391391..402539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE28_RS01990 (NYE28_01990)	-	391788..392471 (-)	684	WP_326146242.1	ABC transporter ATP-binding protein	-
NYE28_RS01995 (NYE28_01995)	-	392486..393922 (-)	1437	WP_059366585.1	ABC transporter permease	-
NYE28_RS02000 (NYE28_02000)	-	394135..394818 (+)	684	WP_007410267.1	response regulator transcription factor	-
NYE28_RS02005 (NYE28_02005)	-	394805..396238 (+)	1434	WP_161936390.1	HAMP domain-containing sensor histidine kinase	-
NYE28_RS02010 (NYE28_02010)	rapC	396391..397539 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
NYE28_RS02015 (NYE28_02015)	phrC	397523..397642 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
NYE28_RS02020 (NYE28_02020)	-	397791..397886 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
NYE28_RS02025 (NYE28_02025)	-	397981..399345 (-)	1365	WP_059366589.1	aspartate kinase	-
NYE28_RS02030 (NYE28_02030)	ceuB	399759..400712 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
NYE28_RS02035 (NYE28_02035)	-	400702..401649 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
NYE28_RS02040 (NYE28_02040)	-	401643..402401 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=984871 NYE28_RS02010 WP_007410270.1 396391..397539(+) (rapC) [Bacillus sp. FSL R5-0443]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=984871 NYE28_RS02010 WP_007410270.1 396391..397539(+) (rapC) [Bacillus sp. FSL R5-0443]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCATACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGTGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568