Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   NYE68_RS16935 Genome accession   NZ_CP152012
Coordinates   3345688..3347994 (-) Length   768 a.a.
NCBI ID   WP_324636435.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0447     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3340688..3352994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE68_RS16895 (NYE68_16895) - 3341148..3341579 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  NYE68_RS16900 (NYE68_16900) - 3341579..3341920 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  NYE68_RS16905 (NYE68_16905) - 3341913..3343394 (+) 1482 WP_072176756.1 Na+/H+ antiporter subunit D -
  NYE68_RS16910 (NYE68_16910) - 3343400..3343876 (+) 477 WP_017419419.1 Na+/H+ antiporter subunit E -
  NYE68_RS16915 (NYE68_16915) - 3343876..3344160 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  NYE68_RS16920 (NYE68_16920) mnhG 3344144..3344518 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  NYE68_RS16925 (NYE68_16925) - 3344558..3344941 (-) 384 WP_014418761.1 hotdog fold thioesterase -
  NYE68_RS16930 (NYE68_16930) comA 3344963..3345607 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  NYE68_RS16935 (NYE68_16935) comP 3345688..3347994 (-) 2307 WP_324636435.1 sensor histidine kinase Regulator
  NYE68_RS16940 (NYE68_16940) comX 3348013..3348189 (-) 177 WP_015240484.1 competence pheromone ComX -
  NYE68_RS16945 (NYE68_16945) - 3348204..3349079 (-) 876 WP_122504180.1 polyprenyl synthetase family protein -
  NYE68_RS16950 (NYE68_16950) degQ 3349231..3349371 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  NYE68_RS16955 (NYE68_16955) - 3349834..3350175 (+) 342 WP_007408677.1 hypothetical protein -
  NYE68_RS16960 (NYE68_16960) - 3350182..3351405 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 89433.72 Da        Isoelectric Point: 8.4098

>NTDB_id=984847 NYE68_RS16935 WP_324636435.1 3345688..3347994(-) (comP) [Bacillus sp. FSL R5-0447]
MKKFIRNFSIVLLFVSLFYVAHIIYFTQNGILVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKIPTEENI
KGQYLAKAEHMKIIRDNHKIDLHNTEFISLNSSYSFFIYIIPCILFALSLLCIFYIYKVNRVKDTYSAYILIIFLLFTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYYHFLYQYFKELKIKFSSGYVVSALYILPVINIIIEIFQNHFAFQLVTNIN
LGTFFLEMMVVYTVIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGRYIYSAIVTSPFIIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIVPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPYKKEFVKVTSEIGKII
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSKANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=984847 NYE68_RS16935 WP_324636435.1 3345688..3347994(-) (comP) [Bacillus sp. FSL R5-0447]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTTGCTCATATTATATATTTTAC
TCAAAACGGAATTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTACAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAATACCGACAGAAGAGAATATA
AAAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATTATAAGGGATAACCATAAAATAGACCTACATAATACGGAATT
TATTTCCTTGAACAGCTCTTATAGCTTTTTTATTTATATTATCCCGTGCATATTGTTTGCTTTAAGCTTGTTGTGTATTT
TTTACATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTATATTTTAATTATCTTTTTATTATTTACATCTATT
GCTTATTTAAGCGCAGGTGGAGTAACTAGAGGGTATGAAATAAACAGATATATTAACCTTTTTACGTTTTTGAATGTACC
TGTACTATACTATCACTTTCTTTATCAATATTTTAAAGAATTAAAAATAAAGTTTTCATCTGGTTATGTTGTGTCTGCTT
TATATATTTTGCCGGTTATTAATATAATAATTGAGATATTCCAAAACCATTTTGCTTTTCAACTTGTTACGAATATTAAT
TTAGGAACATTTTTTTTGGAAATGATGGTTGTTTACACGGTTATTATTTTTTATGGACTAGTCTATAGAAAAAAGGATCA
CTTTTATTTGTTGAAAGTGTTACTTATATCTAACACCATAGCTTTTTTCCCTTTTACAGTTTTTTATATTATACCTGAGG
TATTGTTCGGACGGTATATTTATTCTGCTATAGTGACGTCACCGTTTATAATTATTATTCCGTTAGCGTTAGTCTACCAA
TTCGTGGTCAATAAAATCTATGATATAGATTTTTTGTTAGGCAGAATCAGGTACTATGGTTTCCTTTCCATTGTTCCGAC
TATTGGAGTTGTTTGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTCCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAA
AAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAGCTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCACATCAGAGATTGGCAAGATTATT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCAAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAGCAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGGTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCAAAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGATGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGTGTCCGGGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(568-637)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.755

100

0.59

Multiple sequence alignment