Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MKY18_RS14595 Genome accession   NZ_CP152010
Coordinates   2856666..2857307 (-) Length   213 a.a.
NCBI ID   WP_003213500.1    Uniprot ID   A0AB34QVB6
Organism   Bacillus sp. FSL R7-0672     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2851666..2862307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY18_RS14560 (MKY18_14560) - 2852798..2853229 (+) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -
  MKY18_RS14565 (MKY18_14565) - 2853229..2853570 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  MKY18_RS14570 (MKY18_14570) - 2853563..2855041 (+) 1479 WP_034620106.1 Na+/H+ antiporter subunit D -
  MKY18_RS14575 (MKY18_14575) - 2855048..2855527 (+) 480 WP_044140819.1 Na+/H+ antiporter subunit E -
  MKY18_RS14580 (MKY18_14580) - 2855527..2855808 (+) 282 WP_003213177.1 Na(+)/H(+) antiporter subunit F1 -
  MKY18_RS14585 (MKY18_14585) mnhG 2855792..2856166 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  MKY18_RS14590 (MKY18_14590) - 2856253..2856642 (-) 390 WP_003213775.1 hotdog fold thioesterase -
  MKY18_RS14595 (MKY18_14595) comA 2856666..2857307 (-) 642 WP_003213500.1 response regulator transcription factor Regulator
  MKY18_RS14600 (MKY18_14600) comP 2857388..2859694 (-) 2307 WP_044140820.1 ATP-binding protein Regulator
  MKY18_RS14605 (MKY18_14605) comX 2859708..2859878 (-) 171 WP_012011107.1 competence pheromone ComX -
  MKY18_RS14610 (MKY18_14610) - 2859856..2860779 (-) 924 WP_106029260.1 polyprenyl synthetase family protein -
  MKY18_RS14615 (MKY18_14615) degQ 2860931..2861071 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  MKY18_RS14620 (MKY18_14620) - 2861577..2861930 (+) 354 WP_185106862.1 inner spore coat protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24155.54 Da        Isoelectric Point: 4.5204

>NTDB_id=984699 MKY18_RS14595 WP_003213500.1 2856666..2857307(-) (comA) [Bacillus sp. FSL R7-0672]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNQQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQETDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=984699 MKY18_RS14595 WP_003213500.1 2856666..2857307(-) (comA) [Bacillus sp. FSL R7-0672]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGATCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATTTTGA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAACAAATTCTAGAAACCAACCAACAAGTGAAAATTATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCCATTCGGGCTGGATTGCACGGTGCAATTAGTAAAACAGA
GACAAAAGACAAAATTATTGAATACATACACCGCACATTGCAAGGAGAAGTTGTCATTCAGCTATCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAGCCAGAACAGGCGCAGGAGACCGATCACGAGCTGTTAACAGAGCGAGAGTGTTTGATC
CTCAGAGAAGTGGAAAAAGGATACACGAACCAAGAGATTGCCGATGTGCTGCATTTGAGCAAACGCTCGATTGAATACAG
CTTGACGTCCATCTTTAATAAGCTGAATGTTGGCTCTCGAACCGAAGCGGTGTTAATTGCAAAATCTGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.028

100

0.714

Multiple sequence alignment