Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MKY18_RS11060 Genome accession   NZ_CP152010
Coordinates   2206988..2207791 (-) Length   267 a.a.
NCBI ID   WP_003215740.1    Uniprot ID   A0AB34QSQ5
Organism   Bacillus sp. FSL R7-0672     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2201988..2212791
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY18_RS11040 (MKY18_11040) - 2204197..2204433 (+) 237 WP_050943781.1 DUF2627 domain-containing protein -
  MKY18_RS11045 (MKY18_11045) - 2204468..2205205 (-) 738 WP_065098376.1 glycerophosphodiester phosphodiesterase -
  MKY18_RS11050 (MKY18_11050) - 2205431..2206531 (-) 1101 WP_065098377.1 Rap family tetratricopeptide repeat protein -
  MKY18_RS11055 (MKY18_11055) - 2206591..2206716 (-) 126 WP_260406885.1 hypothetical protein -
  MKY18_RS11060 (MKY18_11060) spo0A 2206988..2207791 (-) 804 WP_003215740.1 sporulation transcription factor Spo0A Regulator
  MKY18_RS11065 (MKY18_11065) spoIVB 2208077..2209354 (-) 1278 WP_003215755.1 SpoIVB peptidase -
  MKY18_RS11070 (MKY18_11070) recN 2209553..2211289 (-) 1737 WP_065098378.1 DNA repair protein RecN Machinery gene
  MKY18_RS11075 (MKY18_11075) argR 2211323..2211772 (-) 450 WP_065098379.1 transcriptional regulator ArgR -
  MKY18_RS11080 (MKY18_11080) - 2211932..2212786 (-) 855 WP_065098380.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29946.45 Da        Isoelectric Point: 6.3914

>NTDB_id=984685 MKY18_RS11060 WP_003215740.1 2206988..2207791(-) (spo0A) [Bacillus sp. FSL R7-0672]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNDMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRRNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=984685 MKY18_RS11060 WP_003215740.1 2206988..2207791(-) (spo0A) [Bacillus sp. FSL R7-0672]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACTGAGTATATTGAGGGACAGGA
AGATATGGAAGTGCTTGGCGTGGCGTATAATGGACAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGATGGCCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGACATGACCAAACAA
CCAAGTGTGATTATGCTAACGGCGTTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCTTATTTCAT
CTTAAAGCCATTTGATATGGAAAACCTAGTCGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCACCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGAAACAAACCTGAACCGAAACGCAGAAACTTAGATGCGAGCATTACAACGATT
ATTCATGAGATTGGCGTCCCGGCTCATATTAAAGGTTACTTATACTTAAGAGAAGCCATTTCAATGGTGTACAATGACAT
CGAGCTTCTCGGAAGCATCACAAAAGTGTTGTATCCAGACATCGCGAAGAAATTTAACACGACCGCGAGCAGAGTAGAAC
GAGCGATTCGTCATGCGATTGAAGTGGCTTGGAGCAGAGGAAACATCGATTCCATTTCCTCACTCTTTGGTTATACAGTC
AGCATGTCTAAAGCAAAACCAACCAATTCTGAATTTATCGCAATGGTGGCTGATCGTCTGCGCCTAGAGCATAGGGCAAG
CTAG

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment