Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACN9LQ_RS18940 | Genome accession | NZ_CP184077 |
| Coordinates | 3865136..3865576 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360914.1 | Uniprot ID | A0A0H2YVZ3 |
| Organism | Escherichia coli strain 1450 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3860136..3870576
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACN9LQ_RS18920 (ACN9LQ_18920) | aroP | 3861136..3862506 (+) | 1371 | WP_000399017.1 | aromatic amino acid transporter AroP | - |
| ACN9LQ_RS18925 (ACN9LQ_18925) | ampE | 3862549..3863403 (-) | 855 | WP_000171980.1 | beta-lactamase regulator AmpE | - |
| ACN9LQ_RS18930 (ACN9LQ_18930) | ampD | 3863400..3863951 (-) | 552 | WP_000923703.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| ACN9LQ_RS18935 (ACN9LQ_18935) | nadC | 3864039..3864932 (+) | 894 | WP_001135168.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| ACN9LQ_RS18940 (ACN9LQ_18940) | pilA | 3865136..3865576 (+) | 441 | WP_000360914.1 | prepilin peptidase-dependent pilin | Machinery gene |
| ACN9LQ_RS18945 (ACN9LQ_18945) | pilB | 3865586..3866971 (+) | 1386 | WP_001025180.1 | type II secretion system protein GspE | Machinery gene |
| ACN9LQ_RS18950 (ACN9LQ_18950) | hofC | 3866961..3868163 (+) | 1203 | WP_000157289.1 | protein transport protein HofC | - |
| ACN9LQ_RS18955 (ACN9LQ_18955) | guaC | 3868198..3869241 (-) | 1044 | WP_001217320.1 | GMP reductase | - |
| ACN9LQ_RS18960 (ACN9LQ_18960) | - | 3869397..3869441 (-) | 45 | WP_120795372.1 | protein YacM | - |
| ACN9LQ_RS18965 (ACN9LQ_18965) | coaE | 3869466..3870086 (+) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15620.77 Da Isoelectric Point: 4.5237
>NTDB_id=984657 ACN9LQ_RS18940 WP_000360914.1 3865136..3865576(+) (pilA) [Escherichia coli strain 1450]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLNTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLNTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=984657 ACN9LQ_RS18940 WP_000360914.1 3865136..3865576(+) (pilA) [Escherichia coli strain 1450]
ATGGACAAGCAACGCGGTTTTACACTTATTGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAAATACCTGCGACGGTGGCAGCAATGGCATTCCTTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGTAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATTGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAAATACCTGCGACGGTGGCAGCAATGGCATTCCTTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGTAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |