Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MKZ22_RS12605 | Genome accession | NZ_CP152009 |
| Coordinates | 2433480..2433815 (+) | Length | 111 a.a. |
| NCBI ID | WP_012010555.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL R7-0675 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2428480..2438815
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKZ22_RS12585 (MKZ22_12585) | gcvT | 2428959..2430056 (-) | 1098 | WP_065098395.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKZ22_RS12590 (MKZ22_12590) | - | 2430617..2432287 (+) | 1671 | WP_342487371.1 | SNF2-related protein | - |
| MKZ22_RS12595 (MKZ22_12595) | - | 2432302..2433099 (+) | 798 | WP_065098397.1 | YqhG family protein | - |
| MKZ22_RS12600 (MKZ22_12600) | - | 2433282..2433446 (+) | 165 | WP_003217357.1 | anti-repressor SinI family protein | - |
| MKZ22_RS12605 (MKZ22_12605) | sinR | 2433480..2433815 (+) | 336 | WP_012010555.1 | transcriptional regulator SinR | Regulator |
| MKZ22_RS12610 (MKZ22_12610) | - | 2433883..2434683 (-) | 801 | WP_044140977.1 | TasA family protein | - |
| MKZ22_RS12615 (MKZ22_12615) | - | 2434742..2435314 (-) | 573 | WP_044140976.1 | signal peptidase I | - |
| MKZ22_RS12620 (MKZ22_12620) | tapA | 2435366..2435893 (-) | 528 | WP_044140975.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKZ22_RS12625 (MKZ22_12625) | - | 2436193..2436471 (+) | 279 | WP_065098439.1 | DUF3889 domain-containing protein | - |
| MKZ22_RS12630 (MKZ22_12630) | - | 2436505..2436699 (-) | 195 | WP_044140973.1 | YqzE family protein | - |
| MKZ22_RS12635 (MKZ22_12635) | comGG | 2436759..2437142 (-) | 384 | WP_044140972.1 | competence type IV pilus minor pilin ComGG | - |
| MKZ22_RS12640 (MKZ22_12640) | comGF | 2437139..2437639 (-) | 501 | WP_044140971.1 | competence type IV pilus minor pilin ComGF | - |
| MKZ22_RS12645 (MKZ22_12645) | comGE | 2437578..2437895 (-) | 318 | WP_044140968.1 | competence type IV pilus minor pilin ComGE | - |
| MKZ22_RS12650 (MKZ22_12650) | comGD | 2437879..2438325 (-) | 447 | WP_106065588.1 | competence type IV pilus minor pilin ComGD | - |
| MKZ22_RS12655 (MKZ22_12655) | comGC | 2438318..2438611 (-) | 294 | WP_003217322.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 13001.59 Da Isoelectric Point: 5.2831
>NTDB_id=984626 MKZ22_RS12605 WP_012010555.1 2433480..2433815(+) (sinR) [Bacillus sp. FSL R7-0675]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=984626 MKZ22_RS12605 WP_012010555.1 2433480..2433815(+) (sinR) [Bacillus sp. FSL R7-0675]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAGAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAGAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |