Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   ACAK30_RS01245 Genome accession   NZ_AP031579
Coordinates   261402..262037 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain JUNP406     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 256402..267037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAK30_RS01230 (JUNP406_0244) - 257189..258373 (+) 1185 WP_000939107.1 S41 family peptidase -
  ACAK30_RS01235 (JUNP406_0245) - 258377..259798 (-) 1422 WP_046693170.1 sigma-54 dependent transcriptional regulator -
  ACAK30_RS01240 (JUNP406_0246) pilS 259823..261391 (-) 1569 WP_369599435.1 PAS domain-containing sensor histidine kinase Regulator
  ACAK30_RS01245 (JUNP406_0247) letA 261402..262037 (-) 636 WP_000633799.1 response regulator Regulator
  ACAK30_RS01250 (JUNP406_0248) pbpG 262250..263296 (+) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  ACAK30_RS01255 (JUNP406_0249) thrC 263404..264543 (-) 1140 WP_000063593.1 threonine synthase -
  ACAK30_RS01260 (JUNP406_0250) - 264599..265900 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  ACAK30_RS01265 (JUNP406_0251) - 266145..266960 (-) 816 WP_004748539.1 DsbC family protein -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=98448 ACAK30_RS01245 WP_000633799.1 261402..262037(-) (letA) [Acinetobacter baumannii strain JUNP406]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=98448 ACAK30_RS01245 WP_000633799.1 261402..262037(-) (letA) [Acinetobacter baumannii strain JUNP406]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCAGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment