Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | MKY80_RS14835 | Genome accession | NZ_CP152004 |
| Coordinates | 3028728..3029060 (-) | Length | 110 a.a. |
| NCBI ID | WP_008181040.1 | Uniprot ID | - |
| Organism | Lysinibacillus sp. FSL R5-0849 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3023728..3034060
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKY80_RS14805 (MKY80_14805) | gcvPA | 3023864..3025210 (-) | 1347 | WP_008181054.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| MKY80_RS14810 (MKY80_14810) | gcvT | 3025236..3026339 (-) | 1104 | WP_089986109.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKY80_RS14815 (MKY80_14815) | - | 3026843..3027358 (-) | 516 | WP_342529996.1 | shikimate kinase | - |
| MKY80_RS14820 (MKY80_14820) | comGF | 3027557..3027985 (-) | 429 | WP_089986111.1 | competence type IV pilus minor pilin ComGF | - |
| MKY80_RS14825 (MKY80_14825) | - | 3027978..3028295 (-) | 318 | WP_089986112.1 | hypothetical protein | - |
| MKY80_RS14830 (MKY80_14830) | comGD | 3028288..3028728 (-) | 441 | WP_008181042.1 | competence type IV pilus minor pilin ComGD | - |
| MKY80_RS14835 (MKY80_14835) | comGC | 3028728..3029060 (-) | 333 | WP_008181040.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MKY80_RS14840 (MKY80_14840) | comGB | 3029062..3030144 (-) | 1083 | WP_089986113.1 | competence type IV pilus assembly protein ComGB | - |
| MKY80_RS14845 (MKY80_14845) | comGA | 3030119..3031138 (-) | 1020 | WP_008181034.1 | competence type IV pilus ATPase ComGA | - |
| MKY80_RS14850 (MKY80_14850) | - | 3031464..3032174 (+) | 711 | WP_008181032.1 | helix-turn-helix domain-containing protein | - |
| MKY80_RS14855 (MKY80_14855) | - | 3032292..3032534 (+) | 243 | WP_004231035.1 | DUF2626 family protein | - |
| MKY80_RS14860 (MKY80_14860) | - | 3032582..3033226 (-) | 645 | WP_089986114.1 | MBL fold metallo-hydrolase | - |
| MKY80_RS14865 (MKY80_14865) | - | 3033396..3033575 (+) | 180 | WP_008181026.1 | DUF2759 domain-containing protein | - |
Sequence
Protein
Download Length: 110 a.a. Molecular weight: 12241.32 Da Isoelectric Point: 5.1145
>NTDB_id=984460 MKY80_RS14835 WP_008181040.1 3028728..3029060(-) (comGC) [Lysinibacillus sp. FSL R5-0849]
MKHIKQQNGFTLIEMLIVLLIISILILITIPNVTKHFATIDEKGCAAYINMVQGQVEAYRVDFMAYPTLEDLVKEGYLKE
NETTCPNKEEIVITTKGEVRLANVGAGTNG
MKHIKQQNGFTLIEMLIVLLIISILILITIPNVTKHFATIDEKGCAAYINMVQGQVEAYRVDFMAYPTLEDLVKEGYLKE
NETTCPNKEEIVITTKGEVRLANVGAGTNG
Nucleotide
Download Length: 333 bp
>NTDB_id=984460 MKY80_RS14835 WP_008181040.1 3028728..3029060(-) (comGC) [Lysinibacillus sp. FSL R5-0849]
ATGAAACATATTAAACAACAAAATGGTTTTACTTTAATCGAAATGCTCATTGTTTTGTTAATCATTTCTATTCTTATTTT
AATTACAATTCCAAATGTTACGAAGCACTTCGCTACGATTGATGAGAAGGGCTGTGCTGCCTATATTAATATGGTACAGG
GGCAAGTAGAAGCCTATAGAGTGGATTTTATGGCATATCCAACTTTAGAGGATTTAGTAAAAGAAGGCTATTTGAAAGAA
AATGAAACAACTTGTCCTAATAAAGAAGAAATAGTTATTACGACTAAGGGAGAGGTACGGTTAGCAAATGTCGGTGCAGG
TACGAATGGCTAA
ATGAAACATATTAAACAACAAAATGGTTTTACTTTAATCGAAATGCTCATTGTTTTGTTAATCATTTCTATTCTTATTTT
AATTACAATTCCAAATGTTACGAAGCACTTCGCTACGATTGATGAGAAGGGCTGTGCTGCCTATATTAATATGGTACAGG
GGCAAGTAGAAGCCTATAGAGTGGATTTTATGGCATATCCAACTTTAGAGGATTTAGTAAAAGAAGGCTATTTGAAAGAA
AATGAAACAACTTGTCCTAATAAAGAAGAAATAGTTATTACGACTAAGGGAGAGGTACGGTTAGCAAATGTCGGTGCAGG
TACGAATGGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
55.208 |
87.273 |
0.482 |
| comGC | Staphylococcus aureus MW2 |
45.263 |
86.364 |
0.391 |
| comGC | Staphylococcus aureus N315 |
45.263 |
86.364 |
0.391 |