Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MKY11_RS11535 | Genome accession | NZ_CP152000 |
| Coordinates | 2250935..2251270 (+) | Length | 111 a.a. |
| NCBI ID | WP_017357978.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL W7-1085 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2245935..2256270
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKY11_RS11515 (MKY11_11515) | gcvT | 2246412..2247509 (-) | 1098 | WP_072367814.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKY11_RS11520 (MKY11_11520) | - | 2248070..2249740 (+) | 1671 | WP_008342199.1 | SNF2-related protein | - |
| MKY11_RS11525 (MKY11_11525) | - | 2249755..2250552 (+) | 798 | WP_017367588.1 | YqhG family protein | - |
| MKY11_RS11530 (MKY11_11530) | - | 2250737..2250901 (+) | 165 | WP_008342197.1 | anti-repressor SinI family protein | - |
| MKY11_RS11535 (MKY11_11535) | sinR | 2250935..2251270 (+) | 336 | WP_017357978.1 | helix-turn-helix domain-containing protein | Regulator |
| MKY11_RS11540 (MKY11_11540) | - | 2251338..2252138 (-) | 801 | WP_008342195.1 | TasA family protein | - |
| MKY11_RS11545 (MKY11_11545) | - | 2252197..2252769 (-) | 573 | WP_017357979.1 | signal peptidase I | - |
| MKY11_RS11550 (MKY11_11550) | tapA | 2252819..2253346 (-) | 528 | WP_045034369.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKY11_RS11555 (MKY11_11555) | - | 2253599..2253925 (+) | 327 | WP_235701742.1 | DUF3889 domain-containing protein | - |
| MKY11_RS11560 (MKY11_11560) | - | 2253960..2254154 (-) | 195 | WP_268360764.1 | YqzE family protein | - |
| MKY11_RS11565 (MKY11_11565) | comGG | 2254215..2254598 (-) | 384 | WP_326111027.1 | competence type IV pilus minor pilin ComGG | - |
| MKY11_RS11570 (MKY11_11570) | comGF | 2254595..2255092 (-) | 498 | WP_342501422.1 | competence type IV pilus minor pilin ComGF | - |
| MKY11_RS11575 (MKY11_11575) | comGE | 2255034..2255348 (-) | 315 | WP_007501227.1 | competence type IV pilus minor pilin ComGE | - |
| MKY11_RS11580 (MKY11_11580) | comGD | 2255332..2255778 (-) | 447 | WP_096881621.1 | competence type IV pilus minor pilin ComGD | - |
| MKY11_RS11585 (MKY11_11585) | comGC | 2255771..2256064 (-) | 294 | WP_024718841.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12936.47 Da Isoelectric Point: 4.8062
>NTDB_id=984297 MKY11_RS11535 WP_017357978.1 2250935..2251270(+) (sinR) [Bacillus sp. FSL W7-1085]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=984297 MKY11_RS11535 WP_017357978.1 2250935..2251270(+) (sinR) [Bacillus sp. FSL W7-1085]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |