Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | MKY84_RS08215 | Genome accession | NZ_CP151997 |
| Coordinates | 1622748..1623056 (+) | Length | 102 a.a. |
| NCBI ID | WP_342525442.1 | Uniprot ID | - |
| Organism | Chryseomicrobium sp. FSL W7-1435 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1617748..1628056
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKY84_RS08190 (MKY84_08190) | - | 1619244..1619423 (-) | 180 | WP_342525436.1 | DUF2759 domain-containing protein | - |
| MKY84_RS08195 (MKY84_08195) | - | 1619568..1620206 (+) | 639 | WP_342525438.1 | MBL fold metallo-hydrolase | - |
| MKY84_RS08200 (MKY84_08200) | - | 1620246..1620488 (-) | 243 | WP_204589389.1 | DUF2626 family protein | - |
| MKY84_RS08205 (MKY84_08205) | comGA | 1620733..1621725 (+) | 993 | WP_342525439.1 | competence type IV pilus ATPase ComGA | - |
| MKY84_RS08210 (MKY84_08210) | - | 1621733..1622734 (+) | 1002 | WP_342525441.1 | type II secretion system F family protein | - |
| MKY84_RS08215 (MKY84_08215) | comGC | 1622748..1623056 (+) | 309 | WP_342525442.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MKY84_RS08220 (MKY84_08220) | comGD | 1623043..1623477 (+) | 435 | WP_342525445.1 | competence type IV pilus minor pilin ComGD | - |
| MKY84_RS08225 (MKY84_08225) | - | 1623470..1623754 (+) | 285 | WP_342525446.1 | hypothetical protein | - |
| MKY84_RS08230 (MKY84_08230) | - | 1623733..1624176 (+) | 444 | WP_342525447.1 | ComGF family competence protein | - |
| MKY84_RS08235 (MKY84_08235) | - | 1624365..1624886 (+) | 522 | WP_342525449.1 | shikimate kinase | - |
| MKY84_RS08240 (MKY84_08240) | gcvT | 1625238..1626314 (+) | 1077 | WP_342525450.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKY84_RS08245 (MKY84_08245) | gcvPA | 1626334..1627680 (+) | 1347 | WP_342528868.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 11309.32 Da Isoelectric Point: 4.8480
>NTDB_id=984124 MKY84_RS08215 WP_342525442.1 1622748..1623056(+) (comGC) [Chryseomicrobium sp. FSL W7-1435]
MKRIRNESGFTLVEMMIVLLIISVLLLITIPNIARHTATIDEKGCEAYRTMLSSQIEAYKLEFKAKPELADLQTEGFVKE
GDLVCPNGTELTIVAGVISEKP
MKRIRNESGFTLVEMMIVLLIISVLLLITIPNIARHTATIDEKGCEAYRTMLSSQIEAYKLEFKAKPELADLQTEGFVKE
GDLVCPNGTELTIVAGVISEKP
Nucleotide
Download Length: 309 bp
>NTDB_id=984124 MKY84_RS08215 WP_342525442.1 1622748..1623056(+) (comGC) [Chryseomicrobium sp. FSL W7-1435]
ATGAAACGTATTCGAAATGAGTCAGGTTTTACATTAGTCGAAATGATGATTGTGTTGCTCATTATTTCTGTATTGTTGCT
AATCACTATACCTAACATTGCTCGTCATACAGCTACCATCGATGAGAAGGGATGCGAGGCTTACCGAACTATGCTAAGTT
CTCAGATTGAAGCTTACAAACTGGAGTTCAAAGCAAAGCCTGAACTTGCAGATTTGCAAACTGAAGGTTTTGTAAAAGAA
GGCGATCTTGTTTGTCCAAACGGTACAGAGCTTACTATTGTTGCAGGCGTAATTAGTGAAAAGCCTTAA
ATGAAACGTATTCGAAATGAGTCAGGTTTTACATTAGTCGAAATGATGATTGTGTTGCTCATTATTTCTGTATTGTTGCT
AATCACTATACCTAACATTGCTCGTCATACAGCTACCATCGATGAGAAGGGATGCGAGGCTTACCGAACTATGCTAAGTT
CTCAGATTGAAGCTTACAAACTGGAGTTCAAAGCAAAGCCTGAACTTGCAGATTTGCAAACTGAAGGTTTTGTAAAAGAA
GGCGATCTTGTTTGTCCAAACGGTACAGAGCTTACTATTGTTGCAGGCGTAATTAGTGAAAAGCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
55.319 |
92.157 |
0.51 |
| comGC | Staphylococcus aureus MW2 |
46.392 |
95.098 |
0.441 |
| comGC | Staphylococcus aureus N315 |
46.392 |
95.098 |
0.441 |