Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   NST15_RS14750 Genome accession   NZ_CP151991
Coordinates   2833785..2834426 (-) Length   213 a.a.
NCBI ID   WP_007500477.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0820     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2828785..2839426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST15_RS14715 (NST15_14715) - 2829913..2830344 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  NST15_RS14720 (NST15_14720) - 2830344..2830685 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  NST15_RS14725 (NST15_14725) - 2830678..2832156 (+) 1479 WP_056702623.1 Na+/H+ antiporter subunit D -
  NST15_RS14730 (NST15_14730) - 2832163..2832642 (+) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  NST15_RS14735 (NST15_14735) - 2832642..2832923 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  NST15_RS14740 (NST15_14740) mnhG 2832907..2833281 (+) 375 WP_035701201.1 monovalent cation/H(+) antiporter subunit G -
  NST15_RS14745 (NST15_14745) - 2833372..2833761 (-) 390 WP_008345855.1 hotdog fold thioesterase -
  NST15_RS14750 (NST15_14750) comA 2833785..2834426 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  NST15_RS14755 (NST15_14755) comP 2834507..2836819 (-) 2313 WP_035701206.1 ATP-binding protein Regulator
  NST15_RS14760 (NST15_14760) comX 2836860..2837030 (-) 171 WP_074041927.1 competence pheromone ComX -
  NST15_RS14765 (NST15_14765) - 2837027..2837941 (-) 915 WP_342498609.1 polyprenyl synthetase family protein -
  NST15_RS14770 (NST15_14770) degQ 2838093..2838233 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  NST15_RS14775 (NST15_14775) - 2838739..2839092 (+) 354 WP_017358939.1 hypothetical protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24140.53 Da        Isoelectric Point: 4.5688

>NTDB_id=983877 NST15_RS14750 WP_007500477.1 2833785..2834426(-) (comA) [Bacillus sp. FSL R5-0820]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEGAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNQQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=983877 NST15_RS14750 WP_007500477.1 2833785..2834426(-) (comA) [Bacillus sp. FSL R5-0820]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGATCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGGCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATCTTGA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCCAAACAAATTCTAGAAACGAATCAACAAGTGAAAATTATC
ATTTATACAGGATATGAAGTAGATGATTATTTCGAAGAGGCCATTCGAGCTGGATTGCATGGTGCAATAAGTAAAACAGA
GACAAAAGACAAAATTATTGAATACATACACCGCACATTGCAAGGAGAAGTTGTCATTCAGCTATCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAGAAGCCAGAACAGGCGCAGCAGACGGATCATGAGCTGTTAACAGAGCGTGAATGTTTAATC
TTAAGAGAAGTGGAAAAAGGGTACACAAACCAAGAGATCGCCGATGTGCTTCATTTGAGCAAACGCTCAATTGAATACAG
TTTGACCTCCATCTTTAATAAGCTGAATGTTGGATCTCGAACAGAAGCGGTGTTAATTGCAAAATCGGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-207)

Response regulator receiver domain (Response_reg)

(4-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.495

100

0.718

Multiple sequence alignment