Detailed information NTG0098379

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: R8507_RS09810
• Genome accession: NZ_AP026925
• Coordinates: 1886709..1887113 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588026.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700097
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1881709..1892113

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8507_RS09770 (PC0094_19100)	rnpA	1882123..1882494 (-)	372	WP_000739246.1	ribonuclease P protein component	-
R8507_RS09775	-	1882511..1882642 (-)	132	WP_000768904.1	hypothetical protein	-
R8507_RS09780 (PC0094_19110)	-	1882643..1883833 (-)	1191	WP_000167766.1	acetate kinase	-
R8507_RS09785 (PC0094_19120)	comYH	1883884..1884837 (-)	954	WP_000345100.1	class I SAM-dependent methyltransferase	Machinery gene
R8507_RS09790	-	1884898..1885492 (-)	595	Protein_1904	class I SAM-dependent methyltransferase	-
R8507_RS09795 (PC0094_19150)	comGG/cglG	1885629..1886042 (-)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
R8507_RS09800 (PC0094_19160)	comGF/cglF	1886020..1886481 (-)	462	WP_000250534.1	competence type IV pilus minor pilin ComGF	Machinery gene
R8507_RS09805 (PC0094_19170)	comGE/cglE	1886444..1886746 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R8507_RS09810 (PC0094_19180)	comGD/cglD	1886709..1887113 (-)	405	WP_000588026.1	competence type IV pilus minor pilin ComGD	Machinery gene
R8507_RS09815 (PC0094_19190)	comGC/cglC	1887106..1887432 (-)	327	WP_000738626.1	comG operon protein ComGC	Machinery gene
R8507_RS09820 (PC0094_19200)	comGB/cglB	1887434..1888450 (-)	1017	WP_074196785.1	competence type IV pilus assembly protein ComGB	Machinery gene
R8507_RS09825 (PC0094_19210)	comGA/cglA/cilD	1888398..1889339 (-)	942	WP_016398028.1	competence type IV pilus ATPase ComGA	Machinery gene
R8507_RS09830 (PC0094_19220)	-	1889415..1889780 (-)	366	WP_000286415.1	DUF1033 family protein	-
R8507_RS09835 (PC0094_19230)	-	1889931..1890989 (-)	1059	WP_044812807.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14684.91 Da
• Isoelectric Point: 10.2164

>NTDB_id=98379 R8507_RS09810 WP_000588026.1 1886709..1887113(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700097]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQMISNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=98379 R8507_RS09810 WP_000588026.1 1886709..1887113(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700097]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTCCAGTCCACTTTTTCAGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATGATTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae Rx1	100	100	1
comGD/cglD	Streptococcus pneumoniae D39	100	100	1
comGD/cglD	Streptococcus pneumoniae R6	100	100	1
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47