Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | NST73_RS11625 | Genome accession | NZ_CP151989 |
| Coordinates | 2266375..2266710 (+) | Length | 111 a.a. |
| NCBI ID | WP_017357978.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL W7-1034 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2261375..2271710
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST73_RS11605 (NST73_11605) | gcvT | 2261853..2262950 (-) | 1098 | WP_072367814.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NST73_RS11610 (NST73_11610) | - | 2263510..2265180 (+) | 1671 | WP_008342199.1 | SNF2-related protein | - |
| NST73_RS11615 (NST73_11615) | - | 2265195..2265992 (+) | 798 | WP_144679351.1 | YqhG family protein | - |
| NST73_RS11620 (NST73_11620) | - | 2266177..2266341 (+) | 165 | WP_008342197.1 | anti-repressor SinI family protein | - |
| NST73_RS11625 (NST73_11625) | sinR | 2266375..2266710 (+) | 336 | WP_017357978.1 | helix-turn-helix domain-containing protein | Regulator |
| NST73_RS11630 (NST73_11630) | - | 2266778..2267578 (-) | 801 | WP_008342195.1 | TasA family protein | - |
| NST73_RS11635 (NST73_11635) | - | 2267637..2268209 (-) | 573 | WP_017357979.1 | signal peptidase I | - |
| NST73_RS11640 (NST73_11640) | tapA | 2268259..2268786 (-) | 528 | WP_342499103.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NST73_RS11645 (NST73_11645) | - | 2269039..2269365 (+) | 327 | WP_039166025.1 | DUF3889 domain-containing protein | - |
| NST73_RS11650 (NST73_11650) | - | 2269400..2269594 (-) | 195 | WP_008342191.1 | YqzE family protein | - |
| NST73_RS11655 (NST73_11655) | comGG | 2269655..2270038 (-) | 384 | WP_342499104.1 | competence type IV pilus minor pilin ComGG | - |
| NST73_RS11660 (NST73_11660) | comGF | 2270035..2270532 (-) | 498 | WP_034647459.1 | competence type IV pilus minor pilin ComGF | - |
| NST73_RS11665 (NST73_11665) | comGE | 2270474..2270788 (-) | 315 | WP_039166034.1 | competence type IV pilus minor pilin ComGE | - |
| NST73_RS11670 (NST73_11670) | comGD | 2270772..2271218 (-) | 447 | WP_096881621.1 | competence type IV pilus minor pilin ComGD | - |
| NST73_RS11675 (NST73_11675) | comGC | 2271211..2271504 (-) | 294 | WP_008342186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12936.47 Da Isoelectric Point: 4.8062
>NTDB_id=983743 NST73_RS11625 WP_017357978.1 2266375..2266710(+) (sinR) [Bacillus sp. FSL W7-1034]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=983743 NST73_RS11625 WP_017357978.1 2266375..2266710(+) (sinR) [Bacillus sp. FSL W7-1034]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |