Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACN9LC_RS18150 | Genome accession | NZ_CP184007 |
| Coordinates | 3722170..3722610 (-) | Length | 146 a.a. |
| NCBI ID | WP_000360914.1 | Uniprot ID | A0A0H2YVZ3 |
| Organism | Escherichia coli strain 1290 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3717170..3727610
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACN9LC_RS18125 (ACN9LC_18125) | coaE | 3717660..3718280 (-) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
| ACN9LC_RS18130 (ACN9LC_18130) | - | 3718305..3718349 (+) | 45 | WP_120795372.1 | protein YacM | - |
| ACN9LC_RS18135 (ACN9LC_18135) | guaC | 3718505..3719548 (+) | 1044 | WP_001217320.1 | GMP reductase | - |
| ACN9LC_RS18140 (ACN9LC_18140) | hofC | 3719583..3720785 (-) | 1203 | WP_000157289.1 | protein transport protein HofC | - |
| ACN9LC_RS18145 (ACN9LC_18145) | gspE | 3720775..3722160 (-) | 1386 | Protein_3548 | type II secretion system protein GspE | - |
| ACN9LC_RS18150 (ACN9LC_18150) | pilA | 3722170..3722610 (-) | 441 | WP_000360914.1 | prepilin peptidase-dependent pilin | Machinery gene |
| ACN9LC_RS18155 (ACN9LC_18155) | nadC | 3722814..3723707 (-) | 894 | WP_001135168.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| ACN9LC_RS18160 (ACN9LC_18160) | ampD | 3723795..3724346 (+) | 552 | WP_000923703.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| ACN9LC_RS18165 (ACN9LC_18165) | ampE | 3724343..3725197 (+) | 855 | WP_000171980.1 | beta-lactamase regulator AmpE | - |
| ACN9LC_RS18170 (ACN9LC_18170) | aroP | 3725240..3726610 (-) | 1371 | WP_000399017.1 | aromatic amino acid transporter AroP | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15620.77 Da Isoelectric Point: 4.5237
>NTDB_id=983727 ACN9LC_RS18150 WP_000360914.1 3722170..3722610(-) (pilA) [Escherichia coli strain 1290]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLNTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLNTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=983727 ACN9LC_RS18150 WP_000360914.1 3722170..3722610(-) (pilA) [Escherichia coli strain 1290]
ATGGACAAGCAACGCGGTTTTACACTTATTGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAAATACCTGCGACGGTGGCAGCAATGGCATTCCTTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGTAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATTGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAAATACCTGCGACGGTGGCAGCAATGGCATTCCTTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGTAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |