Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   NST09_RS14855 Genome accession   NZ_CP151988
Coordinates   2855242..2855883 (-) Length   213 a.a.
NCBI ID   WP_007500477.1    Uniprot ID   -
Organism   Bacillus sp. FSL W7-1346     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2850242..2860883
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST09_RS14820 (NST09_14820) - 2851370..2851801 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  NST09_RS14825 (NST09_14825) - 2851801..2852142 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  NST09_RS14830 (NST09_14830) - 2852135..2853613 (+) 1479 WP_265786131.1 Na+/H+ antiporter subunit D -
  NST09_RS14835 (NST09_14835) - 2853620..2854099 (+) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  NST09_RS14840 (NST09_14840) - 2854099..2854380 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  NST09_RS14845 (NST09_14845) mnhG 2854364..2854738 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  NST09_RS14850 (NST09_14850) - 2854829..2855218 (-) 390 WP_008345855.1 hotdog fold thioesterase -
  NST09_RS14855 (NST09_14855) comA 2855242..2855883 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  NST09_RS14860 (NST09_14860) comP 2855964..2858270 (-) 2307 WP_035389261.1 ATP-binding protein Regulator
  NST09_RS14865 (NST09_14865) comX 2858284..2858454 (-) 171 WP_017358941.1 competence pheromone ComX -
  NST09_RS14870 (NST09_14870) - 2858432..2859355 (-) 924 WP_017367962.1 polyprenyl synthetase family protein -
  NST09_RS14875 (NST09_14875) degQ 2859507..2859647 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  NST09_RS14880 (NST09_14880) - 2860153..2860506 (+) 354 WP_019744042.1 hypothetical protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24140.53 Da        Isoelectric Point: 4.5688

>NTDB_id=983693 NST09_RS14855 WP_007500477.1 2855242..2855883(-) (comA) [Bacillus sp. FSL W7-1346]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEGAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNQQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=983693 NST09_RS14855 WP_007500477.1 2855242..2855883(-) (comA) [Bacillus sp. FSL W7-1346]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGATCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGGCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATCTTGA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCCAAACAAATTCTAGAAACGAATCAACAAGTGAAAATTATC
ATTTATACAGGATATGAAGTAGATGATTATTTCGAAGAGGCCATTCGAGCTGGATTGCATGGTGCAATAAGTAAAACAGA
GACAAAAGACAAAATTATTGAATACATACACCGCACATTGCAAGGAGAAGTTGTCATTCAGCTATCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAGAAGCCAGAACAGGCGCAGCAGACGGATCATGAGCTGTTAACAGAGCGTGAATGTTTAATC
TTAAGAGAAGTGGAAAAAGGGTACACAAACCAAGAGATCGCCGATGTGCTTCATTTGAGCAAACGCTCGATTGAATACAG
TTTGACCTCCATCTTTAATAAGCTGAATGTTGGATCTCGAACAGAAGCGGTGTTAATTGCAAAATCGGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-207)

Response regulator receiver domain (Response_reg)

(4-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.495

100

0.718

Multiple sequence alignment