Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | NST09_RS11450 | Genome accession | NZ_CP151988 |
| Coordinates | 2230568..2230903 (+) | Length | 111 a.a. |
| NCBI ID | WP_017357978.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL W7-1346 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2225568..2235903
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST09_RS11430 (NST09_11430) | gcvT | 2226044..2227141 (-) | 1098 | WP_035390798.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NST09_RS11435 (NST09_11435) | - | 2227703..2229373 (+) | 1671 | WP_342493017.1 | SNF2-related protein | - |
| NST09_RS11440 (NST09_11440) | - | 2229388..2230185 (+) | 798 | WP_035390802.1 | YqhG family protein | - |
| NST09_RS11445 (NST09_11445) | - | 2230370..2230534 (+) | 165 | WP_080934047.1 | anti-repressor SinI family protein | - |
| NST09_RS11450 (NST09_11450) | sinR | 2230568..2230903 (+) | 336 | WP_017357978.1 | helix-turn-helix domain-containing protein | Regulator |
| NST09_RS11455 (NST09_11455) | - | 2230971..2231771 (-) | 801 | WP_007501219.1 | TasA family protein | - |
| NST09_RS11460 (NST09_11460) | - | 2231830..2232402 (-) | 573 | WP_017357979.1 | signal peptidase I | - |
| NST09_RS11465 (NST09_11465) | tapA | 2232452..2232979 (-) | 528 | WP_041091748.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NST09_RS11470 (NST09_11470) | - | 2233232..2233558 (+) | 327 | WP_007501224.1 | DUF3889 domain-containing protein | - |
| NST09_RS11475 (NST09_11475) | - | 2233593..2233787 (-) | 195 | WP_008342191.1 | YqzE family protein | - |
| NST09_RS11480 (NST09_11480) | comGG | 2233848..2234231 (-) | 384 | WP_041091746.1 | competence type IV pilus minor pilin ComGG | - |
| NST09_RS11485 (NST09_11485) | comGF | 2234228..2234725 (-) | 498 | WP_041091745.1 | competence type IV pilus minor pilin ComGF | - |
| NST09_RS11490 (NST09_11490) | comGE | 2234667..2234981 (-) | 315 | WP_017357984.1 | competence type IV pilus minor pilin ComGE | - |
| NST09_RS11495 (NST09_11495) | comGD | 2234965..2235411 (-) | 447 | WP_017357985.1 | competence type IV pilus minor pilin ComGD | - |
| NST09_RS11500 (NST09_11500) | comGC | 2235404..2235697 (-) | 294 | WP_008342186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12936.47 Da Isoelectric Point: 4.8062
>NTDB_id=983681 NST09_RS11450 WP_017357978.1 2230568..2230903(+) (sinR) [Bacillus sp. FSL W7-1346]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=983681 NST09_RS11450 WP_017357978.1 2230568..2230903(+) (sinR) [Bacillus sp. FSL W7-1346]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCTAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCTAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |