Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   NST09_RS11255 Genome accession   NZ_CP151988
Coordinates   2195229..2196032 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus sp. FSL W7-1346     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2190229..2201032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST09_RS11240 (NST09_11240) - 2192445..2192681 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  NST09_RS11245 (NST09_11245) - 2192715..2193452 (-) 738 WP_342493013.1 glycerophosphodiester phosphodiesterase -
  NST09_RS11250 (NST09_11250) - 2193679..2194779 (-) 1101 WP_019743381.1 Rap family tetratricopeptide repeat protein -
  NST09_RS11255 (NST09_11255) spo0A 2195229..2196032 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  NST09_RS11260 (NST09_11260) spoIVB 2196316..2197593 (-) 1278 WP_007501161.1 SpoIVB peptidase -
  NST09_RS11265 (NST09_11265) recN 2197792..2199525 (-) 1734 WP_249668910.1 DNA repair protein RecN Machinery gene
  NST09_RS11270 (NST09_11270) argR 2199560..2200009 (-) 450 WP_217815928.1 transcriptional regulator ArgR -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=983679 NST09_RS11255 WP_008342226.1 2195229..2196032(-) (spo0A) [Bacillus sp. FSL W7-1346]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=983679 NST09_RS11255 WP_008342226.1 2195229..2196032(-) (spo0A) [Bacillus sp. FSL W7-1346]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACTAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGTTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGCTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTAGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment