Detailed information NTG0983563

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: NSU13_RS12340
• Genome accession: NZ_CP151986
• Coordinates: 2386427..2388811 (-)
• Length: 794 a.a.
• NCBI ID: WP_335370816.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL M8-0049
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2381427..2393811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSU13_RS12305 (NSU13_12305)	-	2382425..2383153 (+)	729	WP_024423116.1	amino acid ABC transporter ATP-binding protein	-
NSU13_RS12310 (NSU13_12310)	-	2383167..2383976 (+)	810	WP_041118106.1	transporter substrate-binding domain-containing protein	-
NSU13_RS12315 (NSU13_12315)	-	2384054..2384707 (+)	654	WP_024427868.1	amino acid ABC transporter permease	-
NSU13_RS12320 (NSU13_12320)	-	2384723..2385373 (+)	651	WP_024427867.1	amino acid ABC transporter permease	-
NSU13_RS12325 (NSU13_12325)	-	2385478..2385609 (-)	132	WP_003216198.1	YrzQ family protein	-
NSU13_RS12330 (NSU13_12330)	-	2385630..2385821 (-)	192	WP_003216308.1	hypothetical protein	-
NSU13_RS12335 (NSU13_12335)	-	2385835..2386353 (-)	519	WP_052470355.1	PRC-barrel domain-containing protein	-
NSU13_RS12340 (NSU13_12340)	recD2	2386427..2388811 (-)	2385	WP_335370816.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NSU13_RS12345 (NSU13_12345)	-	2388831..2389484 (-)	654	WP_034279920.1	tetratricopeptide repeat protein	-
NSU13_RS12350 (NSU13_12350)	mnmA	2389544..2390662 (-)	1119	WP_024423123.1	tRNA 2-thiouridine(34) synthase MnmA	-
NSU13_RS12355 (NSU13_12355)	-	2390757..2391899 (-)	1143	WP_034279917.1	cysteine desulfurase family protein	-
NSU13_RS12360 (NSU13_12360)	-	2391918..2392337 (-)	420	WP_024423125.1	Rrf2 family transcriptional regulator	-
NSU13_RS12365 (NSU13_12365)	-	2392546..2393811 (+)	1266	WP_044331684.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89085.69 Da
• Isoelectric Point: 5.3289

>NTDB_id=983563 NSU13_RS12340 WP_335370816.1 2386427..2388811(-) (recD2) [Bacillus sp. FSL M8-0049]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLFTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIRCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=983563 NSU13_RS12340 WP_335370816.1 2386427..2388811(-) (recD2) [Bacillus sp. FSL M8-0049]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTAAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTGACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCAACAACGAAGCAAGGAATCATACATTATCTCTCAAGTGATTTATT
TGAAGGGATAGGGAAAAAGACGGCTGAAGAAATCGTCGGGAAGCTTGGCAATCAGACGCTTCATAAGATTATGCGTGACC
CAGCTGTTTTGTATGATGTACCGCGCTTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATCATGATCAGCCTGAATCAGTATGGCTTTGGTCCACAGCTCAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTTGTCAAGGATGTCGAGGGAATCGGATTTATTAAGGCGGATG
AGCTTGGTGCTAGAACAGGCATCTCAGGTAATGACCCAGAGCGGATTCGCGCCGCCTTGCTATTTACAGTGGAGACAGCT
AGTCTTCAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAACTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGACG
ACCGCTGCTATCATCCATCCTTATTTTATGCAGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTGCTAGCACTTGGCGAGCTGGAGGAGCGGTTAGGCGTCCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCACCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTTTCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGGGCGGCTAAGCGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAACGGTTCGGAGGGCTTCTCGCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCGATTCCTGATCATATCCAAGTGATT
ATGGTAGGAGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCCGTGCC
GGCTGTTACCCTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTGGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATTACTGCACGCTCAAAGGATCGGTCCTTCATTCGGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTTGTCAGCAATGCTGCTCAAAAAGGATTTTCGGCAAAGGACATTCAAGTGCTCGCACCAATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGCGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCCGTGATCTCCTTTGATGGGAATGA
AATCACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCTTATTGCTGCTCCATTCACAAATCACAAGGAAGTGAAT
TCCCGATTGTTGTGCTGCCAGTCGTCAGGAGCTATTACCGAATGCTTCGGCGGAATCTGCTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAATGGGGTGTGAAAAACAATGAGGATTCCCTTAGACA
AACGTCCTTAACGATGCGGCTAGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCATTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.774	100	0.8