Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   NSU13_RS05145 Genome accession   NZ_CP151986
Coordinates   1019986..1020936 (+) Length   316 a.a.
NCBI ID   WP_041117046.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0049     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1014986..1025936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU13_RS05115 (NSU13_05115) - 1016453..1017313 (+) 861 WP_034282185.1 SDR family oxidoreductase -
  NSU13_RS05120 (NSU13_05120) - 1017370..1017606 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  NSU13_RS05125 (NSU13_05125) comK 1017895..1018473 (+) 579 WP_041117040.1 competence protein ComK Regulator
  NSU13_RS05130 (NSU13_05130) - 1018775..1019257 (+) 483 WP_041117042.1 hypothetical protein -
  NSU13_RS05135 (NSU13_05135) - 1019289..1019441 (-) 153 Protein_953 PLP-dependent aminotransferase family protein -
  NSU13_RS05140 (NSU13_05140) - 1019550..1019825 (+) 276 WP_065214458.1 barstar family protein -
  NSU13_RS05145 (NSU13_05145) ceuB 1019986..1020936 (+) 951 WP_041117046.1 ABC transporter permease Machinery gene
  NSU13_RS05150 (NSU13_05150) - 1020929..1021879 (+) 951 WP_041117048.1 iron chelate uptake ABC transporter family permease subunit -
  NSU13_RS05155 (NSU13_05155) - 1021870..1022628 (+) 759 WP_252050319.1 ATP-binding cassette domain-containing protein -
  NSU13_RS05160 (NSU13_05160) - 1022651..1023595 (+) 945 WP_252050320.1 siderophore ABC transporter substrate-binding protein -
  NSU13_RS05165 (NSU13_05165) - 1023734..1024687 (+) 954 WP_034282168.1 LCP family protein -
  NSU13_RS05170 (NSU13_05170) - 1024756..1025118 (-) 363 WP_034282166.1 hypothetical protein -
  NSU13_RS05175 (NSU13_05175) - 1025275..1025892 (+) 618 WP_252050322.1 TVP38/TMEM64 family protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34905.23 Da        Isoelectric Point: 9.6338

>NTDB_id=983536 NSU13_RS05145 WP_041117046.1 1019986..1020936(+) (ceuB) [Bacillus sp. FSL M8-0049]
MKLYQLSLLFVCLACISLFVGVQDLSILELFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=983536 NSU13_RS05145 WP_041117046.1 1019986..1020936(+) (ceuB) [Bacillus sp. FSL M8-0049]
ATGAAGTTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTAGAACTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATCAAGGTGAATGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCTGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGGATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTTTCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GGCTCATGGTAGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491


Multiple sequence alignment