Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSS80_RS05325 Genome accession   NZ_CP151985
Coordinates   1054420..1055370 (+) Length   316 a.a.
NCBI ID   WP_041117046.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0350     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1049420..1060370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS80_RS05300 (NSS80_05300) - 1050898..1051758 (+) 861 WP_034282185.1 SDR family oxidoreductase -
  NSS80_RS05305 (NSS80_05305) - 1051815..1052051 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  NSS80_RS05310 (NSS80_05310) comK 1052341..1052919 (+) 579 WP_041117040.1 competence protein ComK Regulator
  NSS80_RS05315 (NSS80_05315) - 1053218..1053700 (+) 483 WP_041117042.1 hypothetical protein -
  NSS80_RS05320 (NSS80_05320) - 1053983..1054258 (+) 276 WP_041117044.1 barstar family protein -
  NSS80_RS05325 (NSS80_05325) ceuB 1054420..1055370 (+) 951 WP_041117046.1 ABC transporter permease Machinery gene
  NSS80_RS05330 (NSS80_05330) - 1055363..1056313 (+) 951 WP_041117048.1 iron chelate uptake ABC transporter family permease subunit -
  NSS80_RS05335 (NSS80_05335) - 1056304..1057062 (+) 759 WP_041117050.1 ATP-binding cassette domain-containing protein -
  NSS80_RS05340 (NSS80_05340) - 1057085..1058029 (+) 945 WP_317222120.1 siderophore ABC transporter substrate-binding protein -
  NSS80_RS05345 (NSS80_05345) - 1058168..1059121 (+) 954 WP_034282168.1 LCP family protein -
  NSS80_RS05350 (NSS80_05350) - 1059190..1059552 (-) 363 WP_034282166.1 hypothetical protein -
  NSS80_RS05355 (NSS80_05355) - 1059709..1060326 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34905.23 Da        Isoelectric Point: 9.6338

>NTDB_id=983475 NSS80_RS05325 WP_041117046.1 1054420..1055370(+) (ceuB) [Bacillus sp. FSL M8-0350]
MKLYQLSLLFVCLACISLFVGVQDLSILELFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=983475 NSS80_RS05325 WP_041117046.1 1054420..1055370(+) (ceuB) [Bacillus sp. FSL M8-0350]
ATGAAGTTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTAGAACTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGAAATCTTCTTTTCTTAAAAATCCTGCGGCATATCAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCTGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGGATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTTTCGATCTATCGCGGCGATCACTTGAAAAAAAGCCTCCCTCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GGCTCATGGTAGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491

Multiple sequence alignment