Detailed information NTG0983454

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NSQ34_RS16155
• Genome accession: NZ_CP151984
• Coordinates: 3139508..3140164 (-)
• Length: 218 a.a.
• NCBI ID: WP_251232415.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL P2-0069
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3134508..3145164

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ34_RS16120 (NSQ34_16120)	fliW	3134646..3135080 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
NSQ34_RS16125 (NSQ34_16125)	-	3135109..3135687 (-)	579	WP_024426253.1	DUF6470 family protein	-
NSQ34_RS16130 (NSQ34_16130)	flgL	3135734..3136642 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
NSQ34_RS16135 (NSQ34_16135)	flgK	3136652..3138172 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
NSQ34_RS16140 (NSQ34_16140)	-	3138188..3138670 (-)	483	WP_024423619.1	flagellar protein FlgN	-
NSQ34_RS16145 (NSQ34_16145)	flgM	3138689..3138952 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
NSQ34_RS16150 (NSQ34_16150)	-	3139032..3139451 (-)	420	WP_176967174.1	TIGR03826 family flagellar region protein	-
NSQ34_RS16155 (NSQ34_16155)	comFC	3139508..3140164 (-)	657	WP_251232415.1	ComF family protein	Machinery gene
NSQ34_RS16160 (NSQ34_16160)	-	3140191..3140484 (-)	294	WP_024423623.1	competence protein ComFB	-
NSQ34_RS16165 (NSQ34_16165)	comFA	3140533..3141930 (-)	1398	WP_342500965.1	DEAD/DEAH box helicase	Machinery gene
NSQ34_RS16170 (NSQ34_16170)	-	3142051..3142893 (-)	843	WP_024423625.1	DegV family protein	-
NSQ34_RS16175 (NSQ34_16175)	degU	3143109..3143798 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSQ34_RS16180 (NSQ34_16180)	degS	3143863..3145038 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24883.03 Da
• Isoelectric Point: 10.0278

>NTDB_id=983454 NSQ34_RS16155 WP_251232415.1 3139508..3140164(-) (comFC) [Bacillus sp. FSL P2-0069]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCKSWNERSDSIKVLVKNRSVYTYSELMKDVLA
RFKFRGDTALAELFKRDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAVVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=983454 NSQ34_RS16155 WP_251232415.1 3139508..3140164(-) (comFC) [Bacillus sp. FSL P2-0069]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAACGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAAGAGTTGGAATG
AACGCTCTGATTCTATTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAGCGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAGAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGGTTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362