Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   NST65_RS14750 Genome accession   NZ_CP151983
Coordinates   2845224..2845865 (-) Length   213 a.a.
NCBI ID   WP_024423322.1    Uniprot ID   A0AAP7QNQ1
Organism   Bacillus sp. FSL P4-0248     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2840224..2850865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST65_RS14715 (NST65_14715) - 2841350..2841781 (+) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -
  NST65_RS14720 (NST65_14720) - 2841781..2842122 (+) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  NST65_RS14725 (NST65_14725) - 2842115..2843593 (+) 1479 WP_024425940.1 Na+/H+ antiporter subunit D -
  NST65_RS14730 (NST65_14730) - 2843600..2844079 (+) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  NST65_RS14735 (NST65_14735) - 2844079..2844360 (+) 282 WP_024425942.1 Na(+)/H(+) antiporter subunit F1 -
  NST65_RS14740 (NST65_14740) mnhG 2844344..2844718 (+) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  NST65_RS14745 (NST65_14745) - 2844811..2845200 (-) 390 WP_024423321.1 hotdog fold thioesterase -
  NST65_RS14750 (NST65_14750) comA 2845224..2845865 (-) 642 WP_024423322.1 response regulator transcription factor Regulator
  NST65_RS14755 (NST65_14755) comP 2845946..2848237 (-) 2292 WP_065215229.1 ATP-binding protein Regulator
  NST65_RS14760 (NST65_14760) comX 2848251..2848424 (-) 174 WP_046313343.1 competence pheromone ComX -
  NST65_RS14765 (NST65_14765) - 2848402..2849325 (-) 924 WP_065215228.1 polyprenyl synthetase family protein -
  NST65_RS14770 (NST65_14770) degQ 2849477..2849617 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  NST65_RS14775 (NST65_14775) - 2850123..2850479 (+) 357 WP_041115816.1 hypothetical protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24149.54 Da        Isoelectric Point: 4.6344

>NTDB_id=983386 NST65_RS14750 WP_024423322.1 2845224..2845865(-) (comA) [Bacillus sp. FSL P4-0248]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNHQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHDLLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=983386 NST65_RS14750 WP_024423322.1 2845224..2845865(-) (comA) [Bacillus sp. FSL P4-0248]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGACCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATTTTAA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAACAAATTTTAGAAACCAACCATCAAGTGAAAATTATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCTATTCGGGCTGGATTACACGGTGCAATCAGCAAAACAGA
GACGAAAGACAAAATTATTGAATACATACACCGGACATTGCAAGGAGAAGTTGTCATTCAGCTGTCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAGCCAGAACAGGCGCAGCAGACTGATCACGATCTCTTAACCGAACGGGAGTGTTTGATC
CTTAGAGAAGTAGAAAAAGGATACACGAACCAGGAGATTGCCGATGTGCTTCATTTGAGCAAACGGTCAATTGAGTACAG
TTTGACATCCATCTTTAATAAGCTGAATGTTGGATCTCGTACAGAAGCGGTGTTAATTGCCAAGTCTGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.963

100

0.723

Multiple sequence alignment