Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | NST65_RS11150 | Genome accession | NZ_CP151983 |
| Coordinates | 2195548..2195883 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL P4-0248 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2190548..2200883
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST65_RS11130 (NST65_11130) | gcvT | 2191025..2192122 (-) | 1098 | WP_101676874.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NST65_RS11135 (NST65_11135) | - | 2192684..2194354 (+) | 1671 | WP_034280230.1 | SNF2-related protein | - |
| NST65_RS11140 (NST65_11140) | - | 2194369..2195166 (+) | 798 | WP_034280228.1 | YqhG family protein | - |
| NST65_RS11145 (NST65_11145) | - | 2195350..2195514 (+) | 165 | WP_075623492.1 | anti-repressor SinI family protein | - |
| NST65_RS11150 (NST65_11150) | sinR | 2195548..2195883 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| NST65_RS11155 (NST65_11155) | - | 2195951..2196751 (-) | 801 | WP_034280222.1 | TasA family protein | - |
| NST65_RS11160 (NST65_11160) | - | 2196809..2197381 (-) | 573 | WP_034280218.1 | signal peptidase I | - |
| NST65_RS11165 (NST65_11165) | tapA | 2197434..2197961 (-) | 528 | WP_065214636.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NST65_RS11170 (NST65_11170) | - | 2198261..2198539 (+) | 279 | WP_061109527.1 | DUF3889 domain-containing protein | - |
| NST65_RS11175 (NST65_11175) | - | 2198574..2198768 (-) | 195 | WP_046311750.1 | YqzE family protein | - |
| NST65_RS11180 (NST65_11180) | comGG | 2198828..2199211 (-) | 384 | WP_041117969.1 | competence type IV pilus minor pilin ComGG | - |
| NST65_RS11185 (NST65_11185) | comGF | 2199208..2199735 (-) | 528 | WP_259407219.1 | competence type IV pilus minor pilin ComGF | - |
| NST65_RS11190 (NST65_11190) | comGE | 2199647..2199961 (-) | 315 | WP_041106865.1 | competence type IV pilus minor pilin ComGE | - |
| NST65_RS11195 (NST65_11195) | comGD | 2199945..2200391 (-) | 447 | WP_046311754.1 | competence type IV pilus minor pilin ComGD | - |
| NST65_RS11200 (NST65_11200) | comGC | 2200384..2200677 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=983374 NST65_RS11150 WP_024422969.1 2195548..2195883(+) (sinR) [Bacillus sp. FSL P4-0248]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=983374 NST65_RS11150 WP_024422969.1 2195548..2195883(+) (sinR) [Bacillus sp. FSL P4-0248]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |