Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   NSQ25_RS11125 Genome accession   NZ_CP151982
Coordinates   2181171..2181974 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus sp. FSL R5-0512     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2176171..2186974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ25_RS11105 (NSQ25_11105) - 2178377..2178613 (+) 237 WP_024422931.1 DUF2627 domain-containing protein -
  NSQ25_RS11110 (NSQ25_11110) - 2178649..2179386 (-) 738 WP_041117937.1 glycerophosphodiester phosphodiesterase -
  NSQ25_RS11115 (NSQ25_11115) - 2179614..2180714 (-) 1101 WP_024422933.1 Rap family tetratricopeptide repeat protein -
  NSQ25_RS11120 (NSQ25_11120) - 2180702..2180899 (-) 198 WP_024422934.1 hypothetical protein -
  NSQ25_RS11125 (NSQ25_11125) spo0A 2181171..2181974 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  NSQ25_RS11130 (NSQ25_11130) spoIVB 2182260..2183537 (-) 1278 WP_034280268.1 SpoIVB peptidase -
  NSQ25_RS11135 (NSQ25_11135) recN 2183737..2185470 (-) 1734 WP_034280267.1 DNA repair protein RecN Machinery gene
  NSQ25_RS11140 (NSQ25_11140) argR 2185504..2185953 (-) 450 WP_024422938.1 transcriptional regulator ArgR -
  NSQ25_RS11145 (NSQ25_11145) - 2186117..2186971 (-) 855 WP_034280266.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=983311 NSQ25_RS11125 WP_024422935.1 2181171..2181974(-) (spo0A) [Bacillus sp. FSL R5-0512]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=983311 NSQ25_RS11125 WP_024422935.1 2181171..2181974(-) (spo0A) [Bacillus sp. FSL R5-0512]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTACATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAAATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCAATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATTACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTCGCTTGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGCGATTAGAGCATAGAGCAAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment