Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   NSQ25_RS05495 Genome accession   NZ_CP151982
Coordinates   1101062..1102024 (+) Length   320 a.a.
NCBI ID   WP_326136664.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0512     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1096062..1107024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ25_RS05465 (NSQ25_05465) argF 1096400..1097350 (+) 951 WP_211042916.1 ornithine carbamoyltransferase -
  NSQ25_RS05470 (NSQ25_05470) - 1097453..1097632 (+) 180 WP_008348517.1 YjzC family protein -
  NSQ25_RS05475 (NSQ25_05475) - 1097796..1099061 (+) 1266 WP_041117120.1 MFS transporter -
  NSQ25_RS05480 (NSQ25_05480) - 1099174..1099368 (-) 195 WP_003211779.1 YjzD family protein -
  NSQ25_RS05485 (NSQ25_05485) - 1099581..1100321 (+) 741 WP_024425057.1 hypothetical protein -
  NSQ25_RS05490 (NSQ25_05490) - 1100395..1100970 (+) 576 WP_268421564.1 nad binding enzyme -
  NSQ25_RS05495 (NSQ25_05495) med 1101062..1102024 (+) 963 WP_326136664.1 BMP family ABC transporter substrate-binding protein Regulator
  NSQ25_RS05500 (NSQ25_05500) comZ 1102034..1102231 (+) 198 WP_034282083.1 ComZ family protein Regulator
  NSQ25_RS05505 (NSQ25_05505) - 1102241..1102474 (-) 234 WP_034282082.1 hypothetical protein -
  NSQ25_RS05510 (NSQ25_05510) - 1102646..1103584 (+) 939 WP_034282079.1 beta-ketoacyl-ACP synthase III -
  NSQ25_RS05515 (NSQ25_05515) fabF 1103606..1104847 (+) 1242 WP_034282078.1 beta-ketoacyl-ACP synthase II -
  NSQ25_RS05520 (NSQ25_05520) - 1104925..1105728 (+) 804 WP_326136585.1 DUF2268 domain-containing protein -
  NSQ25_RS05525 (NSQ25_05525) - 1105878..1106858 (+) 981 WP_061109669.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 320 a.a.        Molecular weight: 35667.53 Da        Isoelectric Point: 5.0003

>NTDB_id=983294 NSQ25_RS05495 WP_326136664.1 1101062..1102024(+) (med) [Bacillus sp. FSL R5-0512]
MKYQRLVMIFSFLLLLTACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVLYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVVEMGKFSSTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide


Download         Length: 963 bp        

>NTDB_id=983294 NSQ25_RS05495 WP_326136664.1 1101062..1102024(+) (med) [Bacillus sp. FSL R5-0512]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTAACTGCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTAATTATTGGCCATGGCAATGAATACAGTGAAATTTTTAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGGCAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGAGCAAAATATCAAGATGAACATGTACAAGTATTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAACAGGGCGTTGATGTTTTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATACGTCACCGATCAATCC
AACCTCGGCAGCCATACAGTTTTAACGAGCACTGTACAGCATGTTGATAAGGCGTACAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGATGAGTACTCCTTTGATTTTAAAGAAGGAGTGGTCGAGATGGGGAAATTTAGCTCCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCTTACAAAAAAACCGGAAAACTGCCAAATGAAAAG
TGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

63.898

97.813

0.625


Multiple sequence alignment